RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ZNF331Q9NQX6 463 aaPredicted RBP10.55□□□□□ -0.72
CCDC60-201ENST00000327554 OOEPA6NGQ2 149 aa10.55□□□□□ -0.72
CCDC60-201ENST00000327554 AHRRA9YTQ3 701 aa10.55□□□□□ -0.72
CCDC60-201ENST00000327554 S100A7P31151 101 aa10.55□□□□□ -0.72
CCDC60-201ENST00000327554 PRR20EP86478 221 aa10.55□□□□□ -0.72
CCDC60-201ENST00000327554 PRR20CP86479 221 aa10.55□□□□□ -0.72
CCDC60-201ENST00000327554 PRR20DP86480 221 aa10.55□□□□□ -0.72
CCDC60-201ENST00000327554 PRR20BP86481 221 aa10.55□□□□□ -0.72
CCDC60-201ENST00000327554 PRR20AP86496 221 aa10.55□□□□□ -0.72
CCDC60-201ENST00000327554 PSG5Q15238 335 aa10.55□□□□□ -0.72
CCDC60-201ENST00000327554 FAM168AQ92567 244 aa10.55□□□□□ -0.72
CCDC60-201ENST00000327554 NINJ1Q92982 152 aa10.55□□□□□ -0.72
CCDC60-201ENST00000327554 NCOR1P1Q9H4R4 102 aa10.55□□□□□ -0.72
CCDC60-201ENST00000327554 DOCK7Q96N67 2140 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 GGTLC3B5MD39 225 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 HAND1O96004 215 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 MT-CO3P00414 261 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 CA7P43166 264 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 FOXF2Q12947 444 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 PRAMEF5Q5TYX0 476 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 PRAMEF6Q5VXH4 476 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 AMMECR1LQ6DCA0 310 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 VHLLQ6RSH7 139 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 TEPPQ6URK8 271 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 OR52E5Q8NH55 327 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 ZNF596Q8TC21 504 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 ZNF503Q96F45 646 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 SERTAD4Q9NUC0 356 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 OCIAD1Q9NX40 245 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 SLC25A10Q9UBX3 287 aaPredicted RBP10.54□□□□□ -0.72
CCDC60-201ENST00000327554 POLDIP2Q9Y2S7 368 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 WASHC3Q9Y3C0 194 aa10.54□□□□□ -0.72
CCDC60-201ENST00000327554 IGHV3-64DA0A0J9YX35 117 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 FAM90A9PA6NNJ1 464 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 NUDT3O95989 172 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 P04436 131 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 SP1P08047 785 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 NPY1RP25929 384 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 ARR3P36575 388 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 AESQ08117 197 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 OR1C1Q15619 314 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 FAM120AOSQ5T036 256 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 GUSBP11Q6P575 273 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 OR4A16Q8NH70 328 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 URB1-AS1Q96HZ7 61 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 ST20Q9HBF5 79 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 CLEC5AQ9NY25 188 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 IGHV3-43A0A0B4J1X8 118 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 TRAV3A0A0B4J244 114 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 MUC21A0A0G2JKD1 596 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 MUC21A0A140T8X8 626 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 PROP1O75360 226 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 ACTL6BO94805 426 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 IGHV3-43DP0DP04 118 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 MGST1P10620 155 aaKnown RBP10.53□□□□□ -0.72
CCDC60-201ENST00000327554 DUTP33316 252 aaKnown RBP10.53□□□□□ -0.72
CCDC60-201ENST00000327554 PPOXP50336 477 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 RPL8P62917 257 aaKnown RBP10.53□□□□□ -0.72
CCDC60-201ENST00000327554 MUC21Q5SSG8 566 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 ASPHD1Q5U4P2 390 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 SLC35E4Q6ICL7 350 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 RNASEKQ6P5S7 137 aaKnown RBP10.53□□□□□ -0.72
CCDC60-201ENST00000327554 RASL11AQ6T310 242 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 IFI44Q8TCB0 444 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 BCL2L2Q92843 193 aaPredicted RBP10.53□□□□□ -0.72
CCDC60-201ENST00000327554 COQ2Q96H96 371 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 SSBP3Q9BWW4 388 aaPredicted RBP10.53□□□□□ -0.72
CCDC60-201ENST00000327554 TMEM167BQ9NRX6 74 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 PSG11Q9UQ72 335 aa10.53□□□□□ -0.72
CCDC60-201ENST00000327554 OR4C46A6NHA9 309 aa10.52□□□□□ -0.72
CCDC60-201ENST00000327554 TMEM238C9JI98 176 aa10.52□□□□□ -0.72
CCDC60-201ENST00000327554 KLF7O75840 302 aaPredicted RBP10.52□□□□□ -0.72
CCDC60-201ENST00000327554 PLP2Q04941 152 aa10.52□□□□□ -0.72
CCDC60-201ENST00000327554 TUSC5Q8IXB3 177 aa10.52□□□□□ -0.72
CCDC60-201ENST00000327554 MBD6Q96DN6 1003 aa10.52□□□□□ -0.72
CCDC60-201ENST00000327554 TMEM70Q9BUB7 260 aa10.52□□□□□ -0.72
CCDC60-201ENST00000327554 COMMD5Q9GZQ3 224 aa10.52□□□□□ -0.72
CCDC60-201ENST00000327554 SAP30LQ9HAJ7 183 aa10.52□□□□□ -0.72
CCDC60-201ENST00000327554 DEFB108AA8MXU0 73 aa10.52□□□□□ -0.73
CCDC60-201ENST00000327554 FCGR3BO75015 233 aa10.52□□□□□ -0.73
CCDC60-201ENST00000327554 TOX4O94842 621 aa10.52□□□□□ -0.73
CCDC60-201ENST00000327554 IGFBP2P18065 325 aa10.52□□□□□ -0.73
CCDC60-201ENST00000327554 ZNF766Q5HY98 468 aa10.52□□□□□ -0.73
CCDC60-201ENST00000327554 Q6ZR03 302 aa10.52□□□□□ -0.73
CCDC60-201ENST00000327554 VKORC1L1Q8N0U8 176 aa10.52□□□□□ -0.73
CCDC60-201ENST00000327554 C1RLQ9NZP8 487 aa10.52□□□□□ -0.73
CCDC60-201ENST00000327554 PINLYPA6NC86 204 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 C21orf140B9A014 251 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 CRXO43186 299 aaPredicted RBP10.51□□□□□ -0.73
CCDC60-201ENST00000327554 OR2J3O76001 311 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 GATA2P23769 480 aaPredicted RBP10.51□□□□□ -0.73
CCDC60-201ENST00000327554 PSG9Q00887 426 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 PRR27Q6MZM9 219 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 TCF19Q9Y242 345 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 hDV102S1A0JD36 115 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 C2CD4DB7Z1M9 353 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 J3QR06 171 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 GDF1P27539 372 aa10.51□□□□□ -0.73
CCDC60-201ENST00000327554 GPR6P46095 362 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms