RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 TMEM133Q9H2Q1 129 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 RPRMQ9NS64 109 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 CLEC5AQ9NY25 188 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 LINC00473A8K010 186 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 KIAA1324LA8MWY0 1029 aaPredicted RBP7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 H0Y8G0 127 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 IGKV1-5P01602 117 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 PF4V1P10720 104 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 PPOXP50336 477 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 GUCA2BQ16661 112 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 LBHQ53QV2 105 aaPredicted RBP7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 SPRNQ5BIV9 151 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 FAM168AQ92567 244 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 AAMDCQ9H7C9 122 aa7.69□□□□□ -1.18
TMEM39A-201ENST00000319172 A0A0G2JRQ6 117 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 USF2Q15853 346 aaPredicted RBP7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 KRTAP27-1Q3LI81 207 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 C4orf17Q53FE4 359 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 AWAT1Q58HT5 328 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 OR4D5Q8NGN0 318 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 OSR1Q8TAX0 266 aaPredicted RBP7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 MBNL3Q9NUK0 354 aaKnown RBP7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 NUP210LQ5VU65 1888 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 IGLV3-9A0A075B6K5 115 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 FOXH1O75593 365 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 OR9G9P0C7N8 305 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 SAA1P0DJI8 122 aaPredicted RBP7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 DLX1P56177 255 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 FAM24BQ8N5W8 94 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 TECRQ9NZ01 308 aaKnown RBP7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 PPP5D1E7EU14 171 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 DANCRP0C864 163 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 FAM106CPP0CH98 169 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 OR5I1Q13606 314 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 TMEM241Q24JQ0 296 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 HEPN1Q6WQI6 88 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 OR8I2Q8N0Y5 310 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 CYB561D1Q8N8Q1 229 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 RAB24Q969Q5 203 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 GRAMD2BQ96HH9 432 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 ANAPC10Q9UM13 185 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 IGKV1D-33P01593 117 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 IGKV1-33P01594 117 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 LINC00869P0C866 280 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 Q6ZS49 121 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 FAM222BQ8WU58 562 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 RARRES2Q99969 163 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 VAX2Q9UIW0 290 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 S4R3C0 116 aa7.68□□□□□ -1.18
TMEM39A-201ENST00000319172 IGHV3-35A0A0C4DH35 117 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 MFSD2BA6NFX1 497 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 SLC25A5P05141 298 aaKnown RBP7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 ZNF90Q03938 601 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 MAJINQ3KP22 176 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 NMSQ5H8A3 153 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 Q6ZRM9 215 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 LDLRAD3Q86YD5 345 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 KDF1Q8NAX2 398 aaPredicted RBP7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 CLRN3Q8NCR9 226 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 OR4F17Q8NGA8 305 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 OR1L4Q8NGR5 311 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 NPIPB3Q92617 1050 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 WDR61Q9GZS3 305 aaKnown RBP7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 HTN1P15515 57 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 LMO1P25800 156 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 CNN1P51911 297 aaKnown RBP7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 NDUFA6P56556 154 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 TFF3Q07654 80 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 WDR25Q64LD2 544 aaPredicted RBP7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 C11orf53Q8IXP5 236 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 TNRC6AQ8NDV7 1962 aaKnown RBP7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 TDGF1P3P51864 188 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 C10orf55Q5SWW7 151 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 C10orf113Q5VZT2 155 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 WFDC1Q9HC57 220 aa7.67□□□□□ -1.18
TMEM39A-201ENST00000319172 TRAV3A0A0B4J244 114 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 C7orf77A4D0Y5 90 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 FOXI3A8MTJ6 420 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 FBP1P09467 338 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 CCKARP32238 428 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 ERVFC1-1P60608 527 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 FXYD3Q14802 87 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 LINC00518Q8N0U6 118 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 OR5B3Q8NH48 314 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 FAM103A1Q9BTL3 118 aaKnown RBP7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 SEC11CQ9BY50 192 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 RABAC1Q9UI14 185 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 RFNGQ9Y644 331 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 SPINK4O60575 86 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 BCL2P10415 239 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 MSMPQ1L6U9 139 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 PDPNQ86YL7 162 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 WFDC3Q8IUB2 231 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 ZNF705FA8MVS1 300 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 ZNF705DP0CH99 300 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 ZNF705BP0CI00 300 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 SPP1P10451 314 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 MYOD1P15172 320 aa7.66□□□□□ -1.18
TMEM39A-201ENST00000319172 KLRD1Q13241 179 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms