RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 BSXQ3C1V8 233 aa16.81■□□□□ 0.28
TTC39C-202ENST00000317571 C9orf152Q5JTZ5 239 aa16.81■□□□□ 0.28
TTC39C-202ENST00000317571 NEIL1Q96FI4 390 aaPredicted RBP16.81■□□□□ 0.28
TTC39C-202ENST00000317571 SCNM1Q9BWG6 230 aa16.81■□□□□ 0.28
TTC39C-202ENST00000317571 HINT2Q9BX68 163 aa16.81■□□□□ 0.28
TTC39C-202ENST00000317571 NKX6-3A6NJ46 265 aa16.81■□□□□ 0.28
TTC39C-202ENST00000317571 TNFRSF13BO14836 293 aaPredicted RBP16.81■□□□□ 0.28
TTC39C-202ENST00000317571 GNB1P62873 340 aa16.81■□□□□ 0.28
TTC39C-202ENST00000317571 TMEM200BQ69YZ2 307 aa16.81■□□□□ 0.28
TTC39C-202ENST00000317571 ZNF833PQ6ZTB9 187 aa16.81■□□□□ 0.28
TTC39C-202ENST00000317571 MOB3BQ86TA1 216 aa16.81■□□□□ 0.28
TTC39C-202ENST00000317571 NECAP1Q8NC96 275 aa16.81■□□□□ 0.28
TTC39C-202ENST00000317571 MRPL20Q9BYC9 149 aaKnown RBP16.81■□□□□ 0.28
TTC39C-202ENST00000317571 CTSZQ9UBR2 303 aa16.81■□□□□ 0.28
TTC39C-202ENST00000317571 ARFGEF3Q5TH69 2177 aa16.81■□□□□ 0.28
TTC39C-202ENST00000317571 SHISA9B4DS77 424 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 UPK2O00526 184 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 TGOLN2O43493 480 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 FABP4P15090 132 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 SPATA31B1PQ5VZV4 182 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 CCL17Q92583 94 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 DERL1Q9BUN8 251 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 ELOVL1Q9BW60 279 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 PTPRQQ9UMZ3 2332 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 TLN1Q9Y490 2541 aaKnown RBP16.8■□□□□ 0.28
TTC39C-202ENST00000317571 HRASP01112 189 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 PFN1P07737 140 aaKnown RBP16.8■□□□□ 0.28
TTC39C-202ENST00000317571 ARL14EPLP0DKL9 152 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 DIAPH2-AS1Q14236 149 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 TMEM249Q2WGJ8 235 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 NPVFQ9HCQ7 196 aa16.8■□□□□ 0.28
TTC39C-202ENST00000317571 PPIAL4EA0A075B759 164 aa16.79■□□□□ 0.28
TTC39C-202ENST00000317571 PPIAL4DF5H284 164 aa16.79■□□□□ 0.28
TTC39C-202ENST00000317571 STAG3L2P0CL84 134 aa16.79■□□□□ 0.28
TTC39C-202ENST00000317571 STAG3L3P0CL85 134 aa16.79■□□□□ 0.28
TTC39C-202ENST00000317571 PPIAL4FP0DN26 164 aa16.79■□□□□ 0.28
TTC39C-202ENST00000317571 OR10A7Q8NGE5 316 aa16.79■□□□□ 0.28
TTC39C-202ENST00000317571 PPIAL4AQ9Y536 164 aa16.79■□□□□ 0.28
TTC39C-202ENST00000317571 E7EQL1 145 aa16.79■□□□□ 0.28
TTC39C-202ENST00000317571 SAA1P0DJI8 122 aaPredicted RBP16.79■□□□□ 0.28
TTC39C-202ENST00000317571 SEPSECSQ9HD40 501 aaKnown RBP16.79■□□□□ 0.28
TTC39C-202ENST00000317571 RELNP78509 3460 aa16.79■□□□□ 0.28
TTC39C-202ENST00000317571 A0A1W2PPV4 95 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 K7ENP7 123 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 REG1BP48304 166 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 PRCDQ00LT1 54 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 OR4X1Q8NH49 305 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 RNASE6Q93091 150 aaKnown RBP16.78■□□□□ 0.28
TTC39C-202ENST00000317571 ZNF714Q96N38 554 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 TMEM204Q9BSN7 226 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 TMEM106BQ9NUM4 274 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 POLEQ07864 2286 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 TEX50A0A1B0GTY4 177 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 J3QR06 171 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 NDUFS6O75380 124 aaKnown RBP16.78■□□□□ 0.28
TTC39C-202ENST00000317571 FAM87AP0C7U9 286 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 IGFBP2P18065 325 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 MEF2CQ06413 473 aaPredicted RBP16.78■□□□□ 0.28
TTC39C-202ENST00000317571 TMEM30BQ3MIR4 351 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 STPG3Q8N7X2 389 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 PFDN5Q99471 154 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 PRDM13Q9H4Q3 707 aa16.78■□□□□ 0.28
TTC39C-202ENST00000317571 GAL3ST2Q9H3Q3 398 aa16.77■□□□□ 0.28
TTC39C-202ENST00000317571 SRD5A3Q9H8P0 318 aa16.77■□□□□ 0.28
TTC39C-202ENST00000317571 AURKAIP1Q9NWT8 199 aaPredicted RBP16.77■□□□□ 0.28
TTC39C-202ENST00000317571 PRNDQ9UKY0 176 aa16.77■□□□□ 0.28
TTC39C-202ENST00000317571 IGKV1OR2-108A0A075B7D4 117 aa16.77■□□□□ 0.27
TTC39C-202ENST00000317571 CST9LP1Q5W188 147 aa16.77■□□□□ 0.27
TTC39C-202ENST00000317571 ZNF114Q8NC26 417 aa16.77■□□□□ 0.27
TTC39C-202ENST00000317571 PYGO2Q9BRQ0 406 aa16.77■□□□□ 0.27
TTC39C-202ENST00000317571 H0YJW9 148 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 EFNB3Q15768 340 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 RTL8BQ17RB0 113 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 TEPPQ6URK8 271 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 OR10W1Q8NGF6 305 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 H1FXQ92522 213 aaKnown RBP16.76■□□□□ 0.27
TTC39C-202ENST00000317571 ENY2Q9NPA8 101 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 ZNF257Q9Y2Q1 563 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 PGPEP1LA6NFU8 196 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 E7EUB6 86 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 HIST1H1BP16401 226 aaKnown RBP16.76■□□□□ 0.27
TTC39C-202ENST00000317571 GALR1P47211 349 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 MLANAQ16655 118 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 CLEC12BQ2HXU8 276 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 HIST1H2BLQ99880 126 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 PLEKHA3Q9HB20 300 aa16.76■□□□□ 0.27
TTC39C-202ENST00000317571 TRBV20OR9-2A0A075B6H5 130 aa16.75■□□□□ 0.27
TTC39C-202ENST00000317571 SOX15O60248 233 aa16.75■□□□□ 0.27
TTC39C-202ENST00000317571 FOXH1O75593 365 aa16.75■□□□□ 0.27
TTC39C-202ENST00000317571 NDUFB4O95168 129 aa16.75■□□□□ 0.27
TTC39C-202ENST00000317571 LINC00869P0C866 280 aa16.75■□□□□ 0.27
TTC39C-202ENST00000317571 LOXP28300 417 aaPredicted RBP16.75■□□□□ 0.27
TTC39C-202ENST00000317571 PRR20EP86478 221 aa16.75■□□□□ 0.27
TTC39C-202ENST00000317571 PRR20CP86479 221 aa16.75■□□□□ 0.27
TTC39C-202ENST00000317571 PRR20DP86480 221 aa16.75■□□□□ 0.27
TTC39C-202ENST00000317571 PRR20BP86481 221 aa16.75■□□□□ 0.27
TTC39C-202ENST00000317571 PRR20AP86496 221 aa16.75■□□□□ 0.27
TTC39C-202ENST00000317571 BET1LQ9NYM9 111 aa16.75■□□□□ 0.27
TTC39C-202ENST00000317571 PITPNC1Q9UKF7 332 aa16.75■□□□□ 0.27
TTC39C-202ENST00000317571 YTHDF2Q9Y5A9 579 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms