RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 FAM27E3Q08E93 113 aa12.24□□□□□ -0.45
HOXA3-201ENST00000317201 WDR82Q6UXN9 313 aa12.24□□□□□ -0.45
HOXA3-201ENST00000317201 DERL1Q9BUN8 251 aa12.24□□□□□ -0.45
HOXA3-201ENST00000317201 CDC42EP3Q9UKI2 254 aa12.24□□□□□ -0.45
HOXA3-201ENST00000317201 H3BP45 60 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 M0R1B8 84 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 SYNGR1O43759 233 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 ZNF737O75373 536 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 GPX1P07203 203 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 Q6ZS49 121 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 HAPLN4Q86UW8 402 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 CXXC4Q9H2H0 198 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 PSG11Q9UQ72 335 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 DUXBA0A1W2PPF3 345 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 PGPEP1LA6NFU8 196 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 RAMP3O60896 148 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 IGLC1P0CG04 106 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 NTF3P20783 257 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 ERVK11-1P61568 191 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 FAM58AQ8N1B3 248 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 TMEM252Q8N6L7 170 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 SCCPDHQ8NBX0 429 aa12.23□□□□□ -0.45
HOXA3-201ENST00000317201 ZNF253O75346 499 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 SRP14P37108 136 aaKnown RBP12.22□□□□□ -0.45
HOXA3-201ENST00000317201 ECI1P42126 302 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 CA7P43166 264 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 GPR6P46095 362 aaPredicted RBP12.22□□□□□ -0.45
HOXA3-201ENST00000317201 BAXQ07812 192 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 ALKBH6Q3KRA9 238 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 ZNF841Q6ZN19 808 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 ZNF788Q6ZQV5 615 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 WDR86Q86TI4 376 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 SGMS2Q8NHU3 365 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 SIGMAR1Q99720 223 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 TIMM8AO60220 97 aaPredicted RBP12.22□□□□□ -0.45
HOXA3-201ENST00000317201 PITX3O75364 302 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 OR7C1O76099 320 aaPredicted RBP12.22□□□□□ -0.45
HOXA3-201ENST00000317201 IGHV3-13P01766 116 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 DUSP1P28562 367 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 SPIN3Q5JUX0 258 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 OR4F5Q8NH21 305 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 GNPNAT1Q96EK6 184 aaPredicted RBP12.22□□□□□ -0.45
HOXA3-201ENST00000317201 PLEKHF2Q9H8W4 249 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 NPVFQ9HCQ7 196 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 ANXA10Q9UJ72 324 aa12.22□□□□□ -0.45
HOXA3-201ENST00000317201 CRYM-AS1A6NIL9 109 aa12.21□□□□□ -0.45
HOXA3-201ENST00000317201 KIAA1324LA8MWY0 1029 aaPredicted RBP12.21□□□□□ -0.45
HOXA3-201ENST00000317201 MLNRO43193 412 aa12.21□□□□□ -0.45
HOXA3-201ENST00000317201 IGLL1P15814 213 aa12.21□□□□□ -0.45
HOXA3-201ENST00000317201 CXorf66Q5JRM2 361 aaPredicted RBP12.21□□□□□ -0.45
HOXA3-201ENST00000317201 CENPVQ7Z7K6 275 aaPredicted RBP12.21□□□□□ -0.45
HOXA3-201ENST00000317201 NUP37Q8NFH4 326 aa12.21□□□□□ -0.45
HOXA3-201ENST00000317201 OR4P4Q8NGL7 312 aa12.21□□□□□ -0.45
HOXA3-201ENST00000317201 GATA3P23771 443 aa12.21□□□□□ -0.46
HOXA3-201ENST00000317201 HERV-K104P63124 156 aa12.21□□□□□ -0.46
HOXA3-201ENST00000317201 RPL24P83731 157 aaKnown RBP12.21□□□□□ -0.46
HOXA3-201ENST00000317201 OR4A5Q8NH83 315 aa12.21□□□□□ -0.46
HOXA3-201ENST00000317201 BOD1L1Q8NFC6 3051 aa12.2□□□□□ -0.46
HOXA3-201ENST00000317201 IGLV3-9A0A075B6K5 115 aa12.2□□□□□ -0.46
HOXA3-201ENST00000317201 RBMXL2O75526 392 aaKnown RBP12.2□□□□□ -0.46
HOXA3-201ENST00000317201 STPG3Q8N7X2 389 aa12.2□□□□□ -0.46
HOXA3-201ENST00000317201 ANAPC16Q96DE5 110 aa12.2□□□□□ -0.46
HOXA3-201ENST00000317201 MRPL18Q9H0U6 180 aaKnown RBP12.2□□□□□ -0.46
HOXA3-201ENST00000317201 ZNF442Q9H7R0 627 aa12.2□□□□□ -0.46
HOXA3-201ENST00000317201 HES4Q9HCC6 221 aa12.2□□□□□ -0.46
HOXA3-201ENST00000317201 NKX2-6A6NCS4 301 aa12.2□□□□□ -0.46
HOXA3-201ENST00000317201 CD40P25942 277 aa12.2□□□□□ -0.46
HOXA3-201ENST00000317201 FABP6P51161 128 aa12.2□□□□□ -0.46
HOXA3-201ENST00000317201 Q56UQ5 140 aa12.2□□□□□ -0.46
HOXA3-201ENST00000317201 MRPL30Q8TCC3 161 aaKnown RBP12.2□□□□□ -0.46
HOXA3-201ENST00000317201 CACNG8Q8WXS5 425 aa12.2□□□□□ -0.46
HOXA3-201ENST00000317201 RCHY1Q96PM5 261 aa12.2□□□□□ -0.46
HOXA3-201ENST00000317201 SVILO95425 2214 aa12.2□□□□□ -0.46
HOXA3-201ENST00000317201 ATMQ13315 3056 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 TRBV6-6A0A0A6YYG2 114 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 K7EQM0 130 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 TMEM187Q14656 261 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 ABCA11PQ4W5N1 156 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 BVES-AS1Q5T3Y7 98 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 STUMQ69YW2 141 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 Q6ZR03 302 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 HDHD3Q9BSH5 251 aaPredicted RBP12.19□□□□□ -0.46
HOXA3-201ENST00000317201 ZNF286AQ9HBT8 521 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 DECR2Q9NUI1 292 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 NECAP2Q9NVZ3 263 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 M0R1X1 148 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 RHBDL1O75783 438 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 NAPSAO96009 420 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 PLP1P60201 277 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 LCN2P80188 198 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 MEF2BQ02080 365 aaPredicted RBP12.19□□□□□ -0.46
HOXA3-201ENST00000317201 RAB31Q13636 194 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 ZNF146Q15072 292 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 FBXL19-AS1Q494R0 122 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 LIME1Q9H400 295 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 GNB4Q9HAV0 340 aa12.19□□□□□ -0.46
HOXA3-201ENST00000317201 TRGV8A0A0C4DH27 118 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 SPINK4O60575 86 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 TMEM50AO95807 157 aa12.18□□□□□ -0.46
HOXA3-201ENST00000317201 PNKDQ8N490 385 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms