RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 SLC25A31Q9H0C2 315 aa11.22□□□□□ -0.61
MSRA-201ENST00000317173 HIPK2Q9H2X6 1198 aa11.22□□□□□ -0.61
MSRA-201ENST00000317173 TPSG1Q9NRR2 321 aa11.22□□□□□ -0.61
MSRA-201ENST00000317173 FBN1P35555 2871 aaKnown RBP11.22□□□□□ -0.61
MSRA-201ENST00000317173 TEX50A0A1B0GTY4 177 aa11.21□□□□□ -0.61
MSRA-201ENST00000317173 A0A1W2PN81 502 aa11.21□□□□□ -0.61
MSRA-201ENST00000317173 RNF222A6NCQ9 220 aa11.21□□□□□ -0.61
MSRA-201ENST00000317173 FGF16O43320 207 aa11.21□□□□□ -0.61
MSRA-201ENST00000317173 TCF21O43680 179 aa11.21□□□□□ -0.61
MSRA-201ENST00000317173 CHRNA7P36544 502 aa11.21□□□□□ -0.61
MSRA-201ENST00000317173 PAX9P55771 341 aa11.21□□□□□ -0.61
MSRA-201ENST00000317173 RPP30P78346 268 aaKnown RBP11.21□□□□□ -0.61
MSRA-201ENST00000317173 DEFB112Q30KQ8 113 aa11.21□□□□□ -0.61
MSRA-201ENST00000317173 HSD17B13Q7Z5P4 300 aaPredicted RBP11.21□□□□□ -0.61
MSRA-201ENST00000317173 OR5R1Q8NH85 324 aa11.21□□□□□ -0.61
MSRA-201ENST00000317173 SPATA3Q8NHX4 192 aa11.21□□□□□ -0.61
MSRA-201ENST00000317173 SRSF8Q9BRL6 282 aaKnown RBP11.21□□□□□ -0.61
MSRA-201ENST00000317173 PLEKHA3Q9HB20 300 aa11.21□□□□□ -0.61
MSRA-201ENST00000317173 ENY2Q9NPA8 101 aa11.21□□□□□ -0.61
MSRA-201ENST00000317173 NDUFA4L2Q9NRX3 87 aa11.21□□□□□ -0.61
MSRA-201ENST00000317173 NCBP2LA6PVI3 153 aaKnown RBP11.2□□□□□ -0.62
MSRA-201ENST00000317173 H3BUX3 64 aa11.2□□□□□ -0.62
MSRA-201ENST00000317173 TMEM50AO95807 157 aa11.2□□□□□ -0.62
MSRA-201ENST00000317173 RPL12P30050 165 aaKnown RBP11.2□□□□□ -0.62
MSRA-201ENST00000317173 VDAC2P45880 294 aaPredicted RBP11.2□□□□□ -0.62
MSRA-201ENST00000317173 RPL27AP46776 148 aaKnown RBP11.2□□□□□ -0.62
MSRA-201ENST00000317173 HOXA1P49639 335 aaPredicted RBP11.2□□□□□ -0.62
MSRA-201ENST00000317173 COMPP49747 757 aaPredicted RBP11.2□□□□□ -0.62
MSRA-201ENST00000317173 ATP5IP56385 69 aaPredicted RBP11.2□□□□□ -0.62
MSRA-201ENST00000317173 BAXQ07812 192 aa11.2□□□□□ -0.62
MSRA-201ENST00000317173 LGALSLQ3ZCW2 172 aaPredicted RBP11.2□□□□□ -0.62
MSRA-201ENST00000317173 KCNRGQ8N5I3 272 aa11.2□□□□□ -0.62
MSRA-201ENST00000317173 Q8N9W7 124 aa11.2□□□□□ -0.62
MSRA-201ENST00000317173 ZDHHC16Q969W1 377 aa11.2□□□□□ -0.62
MSRA-201ENST00000317173 SLC25A33Q9BSK2 321 aa11.2□□□□□ -0.62
MSRA-201ENST00000317173 PSENENQ9NZ42 101 aa11.2□□□□□ -0.62
MSRA-201ENST00000317173 MOB4Q9Y3A3 225 aa11.2□□□□□ -0.62
MSRA-201ENST00000317173 HSPB11Q9Y547 144 aa11.2□□□□□ -0.62
MSRA-201ENST00000317173 A6NDX4 124 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 BTBD17A6NE02 478 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 M0QZK8 103 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 HLA-DRB1P01911 266 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 HKR1P10072 659 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 IAPPP10997 89 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 CXCL2P19875 107 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 CAV2P51636 162 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 TNXAQ16473 311 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 TUSC1Q2TAM9 212 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 FBLN7Q53RD9 439 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 LAMTOR1Q6IAA8 161 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 ZNF562Q6V9R5 426 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 Q6YL49 198 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 BCL6BQ8N143 479 aaPredicted RBP11.19□□□□□ -0.62
MSRA-201ENST00000317173 TMEM252Q8N6L7 170 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 RASL11BQ9BPW5 248 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 HEYLQ9NQ87 328 aaPredicted RBP11.19□□□□□ -0.62
MSRA-201ENST00000317173 SOX21Q9Y651 276 aaPredicted RBP11.19□□□□□ -0.62
MSRA-201ENST00000317173 U3KQ87 197 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 CA2P00918 260 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 S100A11P31949 105 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 IER3P46695 156 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 PJVKQ0ZLH3 352 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 STX12Q86Y82 276 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 ZNF418Q8TF45 676 aaPredicted RBP11.19□□□□□ -0.62
MSRA-201ENST00000317173 ZC4H2Q9NQZ6 224 aa11.19□□□□□ -0.62
MSRA-201ENST00000317173 STRAPQ9Y3F4 350 aaKnown RBP11.19□□□□□ -0.62
MSRA-201ENST00000317173 DNHD1Q96M86 4753 aa11.18□□□□□ -0.62
MSRA-201ENST00000317173 MSGN1A6NI15 193 aa11.18□□□□□ -0.62
MSRA-201ENST00000317173 MYOD1P15172 320 aa11.18□□□□□ -0.62
MSRA-201ENST00000317173 ERHP84090 104 aaKnown RBP11.18□□□□□ -0.62
MSRA-201ENST00000317173 EWSR1Q01844 656 aaKnown RBP eCLIP11.18□□□□□ -0.62
MSRA-201ENST00000317173 SPANXN5Q5MJ07 72 aa11.18□□□□□ -0.62
MSRA-201ENST00000317173 TMEM14EPQ6UXP3 125 aa11.18□□□□□ -0.62
MSRA-201ENST00000317173 C5orf56Q8N8D9 126 aa11.18□□□□□ -0.62
MSRA-201ENST00000317173 SSMEM1Q8WWF3 244 aa11.18□□□□□ -0.62
MSRA-201ENST00000317173 SRSF12Q8WXF0 261 aaKnown RBP11.18□□□□□ -0.62
MSRA-201ENST00000317173 HINT2Q9BX68 163 aa11.18□□□□□ -0.62
MSRA-201ENST00000317173 ARL6Q9H0F7 186 aa11.18□□□□□ -0.62
MSRA-201ENST00000317173 PLXNB1O43157 2135 aa11.18□□□□□ -0.62
MSRA-201ENST00000317173 SVEP1Q4LDE5 3571 aa11.18□□□□□ -0.62
MSRA-201ENST00000317173 MDFIC2A0A1B0GVS7 189 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 KANTRA0A1W2PQU2 76 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 FAM24AA6NFZ4 105 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 CGB1A6NKQ9 187 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 FCN1O00602 326 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 TAAR5O14804 337 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 CNIH1O95406 144 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 OPN1MWP04001 364 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 OPN1MW2P0DN77 364 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 OPN1MW3P0DN78 364 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 HTR2BP41595 481 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 SULT1A1P50225 295 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 AP2S1P53680 142 aaPredicted RBP11.17□□□□□ -0.62
MSRA-201ENST00000317173 SSBP2P81877 361 aaPredicted RBP11.17□□□□□ -0.62
MSRA-201ENST00000317173 KRTAP24-1Q3LI83 254 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 SPINK9Q5DT21 86 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 TMUB2Q71RG4 321 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 STPG2Q8N412 459 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 TMEM86BQ8N661 226 aa11.17□□□□□ -0.62
MSRA-201ENST00000317173 SLC24A4Q8NFF2 622 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms