RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PITPNC1Q9UKF7 332 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 DYSFO75923 2080 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 A8MWP6 167 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 MYOD1P15172 320 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 FGF7P21781 194 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 CA7P43166 264 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 GPR12P47775 334 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 COTL1Q14019 142 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 MORN2Q502X0 79 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 FFAR4Q5NUL3 377 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 FAM185AQ8N0U4 392 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 TAF15Q92804 592 aaKnown RBP eCLIP6.26□□□□□ -1.41
TRIM55-202ENST00000315962 RNASE6Q93091 150 aaKnown RBP6.26□□□□□ -1.41
TRIM55-202ENST00000315962 OR5B12Q96R08 314 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 NEU1Q99519 415 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 PATZ1Q9HBE1 687 aaKnown RBP6.26□□□□□ -1.41
TRIM55-202ENST00000315962 ZNF705FA8MVS1 300 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-202ENST00000315962 MGST3O14880 152 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 PFN1P07737 140 aaKnown RBP6.26□□□□□ -1.41
TRIM55-202ENST00000315962 ZNF705DP0CH99 300 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-202ENST00000315962 ZNF705BP0CI00 300 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-202ENST00000315962 NPPCP23582 126 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 RND2P52198 227 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 UCNP55089 124 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 JOSD1Q15040 202 aaPredicted RBP6.26□□□□□ -1.41
TRIM55-202ENST00000315962 ZNF645Q8N7E2 425 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 OR10G4Q8NGN3 311 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 OR10G9Q8NGN4 311 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 OR10G7Q8NGN6 311 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 GAFA1Q96PS6 74 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 SNHG12Q9BXW3 62 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 CALYQ9NYX4 217 aa6.26□□□□□ -1.41
TRIM55-202ENST00000315962 TRAV3A0A0B4J244 114 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 ZNF320A2RRD8 509 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 PLXNB1O43157 2135 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 LOXL3P58215 753 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 PAX5Q02548 391 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 DIAPH2-AS1Q14236 149 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 SRSF7Q16629 238 aaKnown RBP eCLIP6.25□□□□□ -1.41
TRIM55-202ENST00000315962 LRRC75BQ2VPJ9 315 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 TMEM41BQ5BJD5 291 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 CT45A1Q5HYN5 189 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 MOB1BQ7L9L4 216 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 CT45A3Q8NHU0 189 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 RAB24Q969Q5 203 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 SMDT1Q9H4I9 107 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 TET2Q6N021 2002 aaPredicted RBP6.25□□□□□ -1.41
TRIM55-202ENST00000315962 TRBV24-1A0A075B6N3 115 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 F2Z2F3 143 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 NDUFS7O75251 213 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 CD3EP07766 207 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 RPL31P62899 125 aaKnown RBP6.25□□□□□ -1.41
TRIM55-202ENST00000315962 RPP30P78346 268 aaKnown RBP6.25□□□□□ -1.41
TRIM55-202ENST00000315962 MZT1Q08AG7 82 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 C17orf58Q2M2W7 97 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 MAJINQ3KP22 176 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 ZNF705AQ6ZN79 300 aaPredicted RBP6.25□□□□□ -1.41
TRIM55-202ENST00000315962 MUC15Q8N387 334 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 RAB40CQ96S21 281 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 HINT2Q9BX68 163 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 SLC25A10Q9UBX3 287 aaPredicted RBP6.25□□□□□ -1.41
TRIM55-202ENST00000315962 NAT8Q9UHE5 227 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 PPIAL4AQ9Y536 164 aa6.25□□□□□ -1.41
TRIM55-202ENST00000315962 USP9YO00507 2555 aaPredicted RBP6.24□□□□□ -1.41
TRIM55-202ENST00000315962 ABCA12Q86UK0 2595 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 KBTBD11O94819 623 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 NDUFB4O95168 129 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 PRB1P04280 392 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 TNFRSF1AP19438 455 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 GNLYP22749 145 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 CHRNB4P30926 498 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 HBG1P69891 147 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 HBG2P69892 147 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 SLC35B1P78383 322 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 STUMQ69YW2 141 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 NUP37Q8NFH4 326 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 SRD5A3Q9H8P0 318 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 TUBG2Q9NRH3 451 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 TMEM106BQ9NUM4 274 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 TANC2Q9HCD6 1990 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 TRGV10A0A0A0MS01 117 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 MARCH11A6NNE9 402 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 IGKV1-16P04430 117 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 IL3RAP26951 378 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 PSMB3P49720 205 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 RAB4BP61018 213 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 PNRC1Q12796 327 aaPredicted RBP6.24□□□□□ -1.41
TRIM55-202ENST00000315962 LIN7CQ9NUP9 197 aaKnown RBP6.24□□□□□ -1.41
TRIM55-202ENST00000315962 CTSZQ9UBR2 303 aa6.24□□□□□ -1.41
TRIM55-202ENST00000315962 PPIAL4EA0A075B759 164 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 SAA2-SAA4A0A096LPE2 208 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 IGHV3-72A0A0B4J1Y9 119 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 LRRC30A6NM36 301 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 B4DEV8 164 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 C11orf94C9JXX5 98 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 PPIAL4DF5H284 164 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 SLC17A3O00476 420 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 DVL1O14640 695 aa6.23□□□□□ -1.41
TRIM55-202ENST00000315962 SAA2P0DJI9 122 aaPredicted RBP6.23□□□□□ -1.41
TRIM55-202ENST00000315962 PPIAL4FP0DN26 164 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms