RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PARD6GQ9BYG4 376 aaPredicted RBP10.6□□□□□ -0.71
RETREG3-201ENST00000309428 PRDM14Q9GZV8 571 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 DCAF16Q9NXF7 216 aa10.6□□□□□ -0.71
RETREG3-201ENST00000309428 TDGF1P3P51864 188 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 SSX8Q7RTT4 187 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 SH2D2AQ9NP31 389 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 OR5B21A6NL26 309 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 LRRC30A6NM36 301 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 ORM2P19652 201 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 RELBQ01201 579 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 OR2T6Q8NHC8 308 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 KIAA1549Q9HCM3 1950 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 TLN2Q9Y4G6 2542 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 SERTM2A0A1B0GWG4 89 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 GNB1P62873 340 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 GABRA6Q16445 453 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 LHFPL4Q7Z7J7 247 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 WDR86Q86TI4 376 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 MIEN1Q9BRT3 115 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 ZPBPQ9BS86 351 aa10.59□□□□□ -0.71
RETREG3-201ENST00000309428 ZNF292O60281 2723 aa10.58□□□□□ -0.71
RETREG3-201ENST00000309428 RPL39P5Q59GN2 51 aa10.58□□□□□ -0.72
RETREG3-201ENST00000309428 ZNF114Q8NC26 417 aa10.58□□□□□ -0.72
RETREG3-201ENST00000309428 ZNF738Q8NE65 137 aa10.58□□□□□ -0.72
RETREG3-201ENST00000309428 SSC4DQ8WTU2 575 aa10.58□□□□□ -0.72
RETREG3-201ENST00000309428 MCRIP2Q9BUT9 160 aaKnown RBP10.58□□□□□ -0.72
RETREG3-201ENST00000309428 DPRXA6NFQ7 191 aa10.58□□□□□ -0.72
RETREG3-201ENST00000309428 APCSP02743 223 aa10.58□□□□□ -0.72
RETREG3-201ENST00000309428 PAFAH1B2P68402 229 aa10.58□□□□□ -0.72
RETREG3-201ENST00000309428 LINC01551Q86U37 167 aa10.58□□□□□ -0.72
RETREG3-201ENST00000309428 MUC15Q8N387 334 aa10.58□□□□□ -0.72
RETREG3-201ENST00000309428 RNF138Q8WVD3 245 aa10.58□□□□□ -0.72
RETREG3-201ENST00000309428 SSBP4Q9BWG4 385 aaPredicted RBP10.58□□□□□ -0.72
RETREG3-201ENST00000309428 NRN1Q9NPD7 142 aa10.58□□□□□ -0.72
RETREG3-201ENST00000309428 UQCR10Q9UDW1 63 aa10.58□□□□□ -0.72
RETREG3-201ENST00000309428 CENPWQ5EE01 88 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 C1orf194Q5T5A4 169 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 LEMD1Q68G75 181 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 OR4A47Q6IF82 309 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 TGIF2LYQ8IUE0 185 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 RNF2Q99496 336 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 NAV3Q8IVL0 2385 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 C12orf77C9JDV5 145 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 DNPH1O43598 174 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 SMPD2O60906 423 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 CXorf1O96002 111 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 CECR9P0C854 216 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 MYOD1P15172 320 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 FAM214BQ7L5A3 538 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 MBD3L1Q8WWY6 194 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 SLC35E1Q96K37 410 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 COMMD5Q9GZQ3 224 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 LPAR2Q9HBW0 351 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 ZNF355PQ9NSJ1 428 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 PROCRQ9UNN8 238 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 MPC1Q9Y5U8 109 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 ARHGAP32A7KAX9 2087 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 F2Z2F3 143 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 COX7A2P2O60397 106 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 NPY1RP25929 384 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 DLX1P56177 255 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 RPL30P62888 115 aaKnown RBP10.57□□□□□ -0.72
RETREG3-201ENST00000309428 FAM27E3Q08E93 113 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 PLGLAQ15195 96 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 OR13A1Q8NGR1 328 aa10.57□□□□□ -0.72
RETREG3-201ENST00000309428 SNRNP40Q96DI7 357 aaKnown RBP10.57□□□□□ -0.72
RETREG3-201ENST00000309428 FOXI3A8MTJ6 420 aaPredicted RBP10.56□□□□□ -0.72
RETREG3-201ENST00000309428 C21orf140B9A014 251 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 FCER1GP30273 86 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 RND2P52198 227 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 SELENOVP59797 346 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 PMCHL1Q16048 86 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 MOB1BQ7L9L4 216 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 PLSCR2Q9NRY7 297 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 ANAPC10Q9UM13 185 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 IGLV3-1P01715 115 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 CD99P14209 185 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 ZNF718Q3SXZ3 478 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 IBA57Q5T440 356 aaKnown RBP10.56□□□□□ -0.72
RETREG3-201ENST00000309428 SPATA31B1PQ5VZV4 182 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 TMEM42Q69YG0 159 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 OR4B1Q8NGF8 309 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 BCL2L2Q92843 193 aaPredicted RBP10.56□□□□□ -0.72
RETREG3-201ENST00000309428 SCRT1Q9BWW7 348 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 KCNIP2Q9NS61 270 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 PTPN13Q12923 2485 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 DUX4L9Q6RFH8 374 aaPredicted RBP10.56□□□□□ -0.72
RETREG3-201ENST00000309428 OR8B2Q96RD0 313 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 MS4A5Q9H3V2 200 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 LAMTOR2Q9Y2Q5 125 aa10.56□□□□□ -0.72
RETREG3-201ENST00000309428 A0A1B0GW64 132 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 SLC25A5P05141 298 aaKnown RBP10.55□□□□□ -0.72
RETREG3-201ENST00000309428 TIMP3P35625 211 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 OPRK1P41145 380 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 TAS2R45P59539 299 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 TEPPQ6URK8 271 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 BEND2Q8NDZ0 799 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 LRBAP50851 2863 aa10.55□□□□□ -0.72
RETREG3-201ENST00000309428 ASH1LQ9NR48 2969 aaKnown RBP10.55□□□□□ -0.72
RETREG3-201ENST00000309428 HAPLN4Q86UW8 402 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms