RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 LINC00310P59036 64 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 MIR17HGQ75NE6 70 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 ZFP30Q9Y2G7 519 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 POLEQ07864 2286 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 TNRC6AQ8NDV7 1962 aaKnown RBP9.25□□□□□ -0.93
PTPN7-201ENST00000309017 TRAV9-1A0A075B6T8 112 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 TIPARPQ7Z3E1 657 aaKnown RBP9.25□□□□□ -0.93
PTPN7-201ENST00000309017 MRPL52Q86TS9 123 aaKnown RBP9.25□□□□□ -0.93
PTPN7-201ENST00000309017 C1orf174Q8IYL3 243 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 DPRXA6NFQ7 191 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 MT-ND6P03923 174 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 IGFBP2P18065 325 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 DUTP33316 252 aaKnown RBP9.25□□□□□ -0.93
PTPN7-201ENST00000309017 MEOX1P50221 254 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 SLC24A4Q8NFF2 622 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 KLF14Q8TD94 323 aaPredicted RBP9.25□□□□□ -0.93
PTPN7-201ENST00000309017 IL19Q9UHD0 177 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 LAMTOR2Q9Y2Q5 125 aa9.25□□□□□ -0.93
PTPN7-201ENST00000309017 AGFG2O95081 481 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 USF1P22415 310 aaPredicted RBP9.24□□□□□ -0.93
PTPN7-201ENST00000309017 KMT2EQ8IZD2 1858 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 LEAP2Q969E1 77 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 KCNS1Q96KK3 526 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 CLCF1Q9UBD9 225 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 SLC45A2Q9UMX9 530 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 TRBV9A0A0B4J1U6 114 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 Q0VG73 95 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 GABRA6Q16445 453 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 IBA57Q5T440 356 aaKnown RBP9.24□□□□□ -0.93
PTPN7-201ENST00000309017 PRR27Q6MZM9 219 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 ACP7Q6ZNF0 438 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 Q8N7P7 452 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 LRRC29Q8WV35 223 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 FAM122AQ96E09 287 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 RCHY1Q96PM5 261 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 SSBP3Q9BWW4 388 aaPredicted RBP9.24□□□□□ -0.93
PTPN7-201ENST00000309017 GNB1LQ9BYB4 327 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 PILRBQ9UKJ0 227 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 RNF114Q9Y508 228 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 GFRA3O60609 400 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 YPEL1O60688 119 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 CA1P00915 261 aaPredicted RBP9.24□□□□□ -0.93
PTPN7-201ENST00000309017 ADH4P08319 380 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 GATA2P23769 480 aaPredicted RBP9.24□□□□□ -0.93
PTPN7-201ENST00000309017 MRPS11P82912 194 aaKnown RBP9.24□□□□□ -0.93
PTPN7-201ENST00000309017 RNF151Q2KHN1 245 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 Q56UQ5 140 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 STUMQ69YW2 141 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 Q6ZR03 302 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 MAFAQ8NHW3 353 aaPredicted RBP9.24□□□□□ -0.93
PTPN7-201ENST00000309017 YPEL2Q96QA6 119 aa9.24□□□□□ -0.93
PTPN7-201ENST00000309017 LNP1A1A4G5 178 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 ZNF324O75467 553 aaPredicted RBP9.23□□□□□ -0.93
PTPN7-201ENST00000309017 CER1O95813 267 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 CRYABP02511 175 aaKnown RBP9.23□□□□□ -0.93
PTPN7-201ENST00000309017 APCSP02743 223 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 GNG10P50151 68 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 ZNF718Q3SXZ3 478 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 PMS2CLQ68D20 193 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 STPG4Q8N801 248 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 CXXC4Q9H2H0 198 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 LCN12Q6JVE5 192 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 RNASEKQ6P5S7 137 aaKnown RBP9.23□□□□□ -0.93
PTPN7-201ENST00000309017 WDR31Q8NA23 367 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 TMEM167BQ9NRX6 74 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 DUSP13Q9UII6 198 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 V9GYV3 84 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 HCFC1P51610 2035 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 ZFYVE26Q68DK2 2539 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 TRGV10A0A0A0MS01 117 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 NTN3O00634 580 aaPredicted RBP9.23□□□□□ -0.93
PTPN7-201ENST00000309017 C3orf79P0CE67 100 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 CDX2Q99626 313 aaPredicted RBP9.23□□□□□ -0.93
PTPN7-201ENST00000309017 CHODLQ9H9P2 273 aa9.23□□□□□ -0.93
PTPN7-201ENST00000309017 TIMM8BQ9Y5J9 83 aaPredicted RBP9.23□□□□□ -0.93
PTPN7-201ENST00000309017 TNRC18O15417 2968 aaPredicted RBP9.22□□□□□ -0.93
PTPN7-201ENST00000309017 HEATR1Q9H583 2144 aaKnown RBP9.22□□□□□ -0.93
PTPN7-201ENST00000309017 A0A1W2PS18 150 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 C9JCJ5 164 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 CA2P00918 260 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 HLA-DQA1P01909 254 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 CAMPP49913 170 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 TMEM249Q2WGJ8 235 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 ASPHD1Q5U4P2 390 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 Q6ZVH6 145 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 PPP1R35Q8TAP8 253 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 CORO2AQ92828 525 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 NABP2Q9BQ15 211 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 BET1LQ9NYM9 111 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 KLRC4-KLRK1H3BQV0 150 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 HYPMO75409 117 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 AMY1AP04745 511 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 ZNF83P51522 516 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 ZNF439Q8NDP4 499 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 OR4S2Q8NH73 311 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 TECRQ9NZ01 308 aaKnown RBP9.22□□□□□ -0.93
PTPN7-201ENST00000309017 CADP27708 2225 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 IGHV3OR15-7A0A075B7D8 119 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 M0R2Z0 102 aa9.22□□□□□ -0.93
PTPN7-201ENST00000309017 PRDX2P32119 198 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms