RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 GATD1Q8NB37 220 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 CHCHD5Q9BSY4 110 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 FBXL15Q9H469 300 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 OR9G4Q8NGQ1 327 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 IMMP2LQ96T52 175 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 LAMTOR3Q9UHA4 124 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 KIAA1217Q5T5P2 1943 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 IGHV3OR16-8A0A075B7F1 116 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 CGAP01215 116 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 DANCRP0C864 163 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 ZNF818PQ6ZRF7 136 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 IFI27L2Q9H2X8 130 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 IGHV1-45A0A0A0MS14 117 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 IGKV1D-33P01593 117 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 IGKV1-33P01594 117 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 CELA2AP08217 269 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 CD28P10747 220 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 IRF3Q14653 427 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 WDYHV1Q96HA8 205 aa8.83□□□□□ -1
CLIP1-201ENST00000302528 FHITP49789 147 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 PCOLCEQ15113 449 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 FAM57AQ8TBR7 257 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 SCN1AP35498 2009 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 APC2O95996 2303 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 A8MWV9 139 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 LDLRAD2Q5SZI1 272 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 RTN4RL2Q86UN3 420 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 SAXO1Q8IYX7 474 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 DRAM1Q8N682 238 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 FNDC4Q9H6D8 234 aaPredicted RBP8.82□□□□□ -1
CLIP1-201ENST00000302528 ADARB2-AS1A8MUL3 147 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 IGHV3-11P01762 117 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 UCP3P55916 312 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 TRIP11Q15643 1979 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 RFLNBQ8N5W9 214 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 TMEM167AQ8TBQ9 72 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 TMEM54Q969K7 222 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 DPM3Q9P2X0 92 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 RPL39P5Q59GN2 51 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 LIMS2Q7Z4I7 341 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 OR52E5Q8NH55 327 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 KNL1Q8NG31 2342 aa8.82□□□□□ -1
CLIP1-201ENST00000302528 HLA-DQB1P01920 261 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 C19orf48Q6RUI8 117 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 FAM19A2Q8N3H0 131 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 GLMPQ8WWB7 406 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 ARPC1AQ92747 370 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 PRDM13Q9H4Q3 707 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 ZNF703Q9H7S9 590 aaPredicted RBP8.81□□□□□ -1
CLIP1-201ENST00000302528 VWC2LB2RUY7 222 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 M0R2P5 195 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 LGALS1P09382 135 aaKnown RBP8.81□□□□□ -1
CLIP1-201ENST00000302528 FOXL2P58012 376 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 GAGE2EQ4V326 116 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 LINC01560Q8TB33 94 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 GAGE2DQ9UEU5 116 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 FOXS1O43638 330 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 MYOD1P15172 320 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 AQP3Q92482 292 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 SIGMAR1Q99720 223 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 GDF15Q99988 308 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 SEPSECSQ9HD40 501 aaKnown RBP8.81□□□□□ -1
CLIP1-201ENST00000302528 CYSLTR1Q9Y271 337 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 SIRT4Q9Y6E7 314 aaPredicted RBP8.81□□□□□ -1
CLIP1-201ENST00000302528 QSER1Q2KHR3 1735 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 SLC25A47Q6Q0C1 308 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 LINC00518Q8N0U6 118 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 C8orf82Q6P1X6 216 aaPredicted RBP8.81□□□□□ -1
CLIP1-201ENST00000302528 MORN3Q6PF18 240 aaPredicted RBP8.81□□□□□ -1
CLIP1-201ENST00000302528 TMEM52Q8NDY8 209 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 ORAOV1Q8WV07 137 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 ELOVL5Q9NYP7 299 aa8.81□□□□□ -1
CLIP1-201ENST00000302528 FER1L6Q2WGJ9 1857 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 PRSS23O95084 383 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 IGFBP2P18065 325 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 IGKV1D-16P01601 117 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 APOBEC3AP31941 199 aaPredicted RBP8.8□□□□□ -1
CLIP1-201ENST00000302528 SRSF1Q07955 248 aaKnown RBP eCLIP8.8□□□□□ -1
CLIP1-201ENST00000302528 C3orf36Q3SXR2 165 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 BHLHA9Q7RTU4 235 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 OR13A1Q8NGR1 328 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 OSR1Q8TAX0 266 aaPredicted RBP8.8□□□□□ -1
CLIP1-201ENST00000302528 TRBV5-5A0A0J9YX44 114 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 SCO2A0A1W2PP80 73 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 PRR19A6NJB7 356 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 DPM2O94777 84 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 EFEMP2O95967 443 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 NGFRP08138 427 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 TMEM187Q14656 261 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 ZNRF1Q8ND25 227 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 ZNF501Q96CX3 271 aaPredicted RBP8.8□□□□□ -1
CLIP1-201ENST00000302528 MRPS18AQ9NVS2 196 aaKnown RBP8.8□□□□□ -1
CLIP1-201ENST00000302528 UBR3Q6ZT12 1888 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 NINQ8N4C6 2090 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 PSCAO43653 123 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 COQ2Q96H96 371 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 LOXL4Q96JB6 756 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 C5orf66Q9H5L9 145 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 C7orf69Q9H7B7 122 aa8.8□□□□□ -1
CLIP1-201ENST00000302528 IGHV3-64A0A075B6Q5 118 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms