RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PSMB3P49720 205 aa18.03■□□□□ 0.48
TPM4-201ENST00000300933 TMEM14EPQ6UXP3 125 aa18.03■□□□□ 0.48
TPM4-201ENST00000300933 NUP37Q8NFH4 326 aa18.03■□□□□ 0.48
TPM4-201ENST00000300933 FAM222BQ8WU58 562 aa18.03■□□□□ 0.48
TPM4-201ENST00000300933 ELOVL5Q9NYP7 299 aa18.03■□□□□ 0.48
TPM4-201ENST00000300933 POLR3KQ9Y2Y1 108 aaPredicted RBP18.03■□□□□ 0.48
TPM4-201ENST00000300933 SVEP1Q4LDE5 3571 aa18.03■□□□□ 0.48
TPM4-201ENST00000300933 KBTBD11-OT1A0A1B0GTJ5 212 aa18.03■□□□□ 0.48
TPM4-201ENST00000300933 C17orf100A8MU93 164 aa18.03■□□□□ 0.48
TPM4-201ENST00000300933 F2RL2O00254 374 aa18.03■□□□□ 0.48
TPM4-201ENST00000300933 TMEM256Q8N2U0 113 aa18.03■□□□□ 0.48
TPM4-201ENST00000300933 RND1Q92730 232 aa18.03■□□□□ 0.48
TPM4-201ENST00000300933 TAF15Q92804 592 aaKnown RBP eCLIP18.03■□□□□ 0.48
TPM4-201ENST00000300933 SAA2-SAA4A0A096LPE2 208 aa18.02■□□□□ 0.48
TPM4-201ENST00000300933 TRGV10A0A0A0MS01 117 aa18.02■□□□□ 0.48
TPM4-201ENST00000300933 RAB29O14966 203 aa18.02■□□□□ 0.48
TPM4-201ENST00000300933 SAA2P0DJI9 122 aaPredicted RBP18.02■□□□□ 0.48
TPM4-201ENST00000300933 GRNP28799 593 aaKnown RBP18.02■□□□□ 0.48
TPM4-201ENST00000300933 CNN1P51911 297 aaKnown RBP18.02■□□□□ 0.48
TPM4-201ENST00000300933 C21orf62-AS1Q17RA5 79 aa18.02■□□□□ 0.48
TPM4-201ENST00000300933 CR1LQ2VPA4 569 aa18.02■□□□□ 0.48
TPM4-201ENST00000300933 ZNF705AQ6ZN79 300 aaPredicted RBP18.02■□□□□ 0.48
TPM4-201ENST00000300933 SDSLQ96GA7 329 aa18.02■□□□□ 0.48
TPM4-201ENST00000300933 CST9LP1Q5W188 147 aa18.02■□□□□ 0.47
TPM4-201ENST00000300933 GBGT1Q8N5D6 347 aa18.02■□□□□ 0.47
TPM4-201ENST00000300933 COL12A1Q99715 3063 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 ZNF705FA8MVS1 300 aaPredicted RBP18.01■□□□□ 0.47
TPM4-201ENST00000300933 FCN3O75636 299 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 ZNF705DP0CH99 300 aaPredicted RBP18.01■□□□□ 0.47
TPM4-201ENST00000300933 ZNF705BP0CI00 300 aaPredicted RBP18.01■□□□□ 0.47
TPM4-201ENST00000300933 MYOD1P15172 320 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 ACSM6Q6P461 480 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 ZNF788Q6ZQV5 615 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 JKAMPQ9P055 326 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 FAM90A26D6RGX4 464 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 NUPR1O60356 82 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 NHLH1Q02575 133 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 TFF3Q07654 80 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 ACOT6Q3I5F7 207 aaPredicted RBP18.01■□□□□ 0.47
TPM4-201ENST00000300933 FAM78BQ5VT40 261 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 LINC01560Q8TB33 94 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 PINX1Q96BK5 328 aaKnown RBP18.01■□□□□ 0.47
TPM4-201ENST00000300933 S1PR3Q99500 378 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 SAP30LQ9HAJ7 183 aa18.01■□□□□ 0.47
TPM4-201ENST00000300933 PLAUP00749 431 aa18■□□□□ 0.47
TPM4-201ENST00000300933 MBP02144 154 aa18■□□□□ 0.47
TPM4-201ENST00000300933 CCL3L1P16619 93 aa18■□□□□ 0.47
TPM4-201ENST00000300933 LYPD2Q6UXB3 125 aa17.99■□□□□ 0.47
TPM4-201ENST00000300933 NAGKQ9UJ70 344 aa17.99■□□□□ 0.47
TPM4-201ENST00000300933 MSRB2Q9Y3D2 182 aa17.99■□□□□ 0.47
TPM4-201ENST00000300933 FAM90A27PA6NNH2 459 aa17.99■□□□□ 0.47
TPM4-201ENST00000300933 PAGE4O60829 102 aa17.99■□□□□ 0.47
TPM4-201ENST00000300933 C1orf194Q5T5A4 169 aa17.99■□□□□ 0.47
TPM4-201ENST00000300933 CENPVQ7Z7K6 275 aaPredicted RBP17.99■□□□□ 0.47
TPM4-201ENST00000300933 CSMD1Q96PZ7 3565 aa17.99■□□□□ 0.47
TPM4-201ENST00000300933 PMS2P5A8MQ11 134 aa17.98■□□□□ 0.47
TPM4-201ENST00000300933 HPRT1P00492 218 aa17.98■□□□□ 0.47
TPM4-201ENST00000300933 A0A0U1RQK1 487 aa17.98■□□□□ 0.47
TPM4-201ENST00000300933 ZNF320A2RRD8 509 aa17.98■□□□□ 0.47
TPM4-201ENST00000300933 E7EQL1 145 aa17.98■□□□□ 0.47
TPM4-201ENST00000300933 RAB4AP20338 218 aa17.98■□□□□ 0.47
TPM4-201ENST00000300933 OR10P1Q8NGE3 313 aa17.98■□□□□ 0.47
TPM4-201ENST00000300933 OR4A16Q8NH70 328 aa17.98■□□□□ 0.47
TPM4-201ENST00000300933 MS4A10Q96PG2 267 aa17.98■□□□□ 0.47
TPM4-201ENST00000300933 TRAPPC1Q9Y5R8 145 aa17.98■□□□□ 0.47
TPM4-201ENST00000300933 GGCTO75223 188 aaKnown RBP17.97■□□□□ 0.47
TPM4-201ENST00000300933 TNFRSF1AP19438 455 aa17.97■□□□□ 0.47
TPM4-201ENST00000300933 IL3RAP26951 378 aa17.97■□□□□ 0.47
TPM4-201ENST00000300933 MRPS11P82912 194 aaKnown RBP17.97■□□□□ 0.47
TPM4-201ENST00000300933 ABHD12Q8N2K0 398 aa17.97■□□□□ 0.47
TPM4-201ENST00000300933 ANAPC16Q96DE5 110 aa17.97■□□□□ 0.47
TPM4-201ENST00000300933 TBX15Q96SF7 602 aa17.97■□□□□ 0.47
TPM4-201ENST00000300933 TMEM208Q9BTX3 173 aa17.97■□□□□ 0.47
TPM4-201ENST00000300933 TMEM250H0YL14 139 aa17.97■□□□□ 0.47
TPM4-201ENST00000300933 NPSP0C0P6 89 aa17.97■□□□□ 0.47
TPM4-201ENST00000300933 PRB3Q04118 309 aaPredicted RBP17.97■□□□□ 0.47
TPM4-201ENST00000300933 OR10G9Q8NGN4 311 aa17.97■□□□□ 0.47
TPM4-201ENST00000300933 OR10G7Q8NGN6 311 aa17.97■□□□□ 0.47
TPM4-201ENST00000300933 H1FXQ92522 213 aaKnown RBP17.97■□□□□ 0.47
TPM4-201ENST00000300933 TMEM140Q9NV12 185 aa17.97■□□□□ 0.47
TPM4-201ENST00000300933 SLC25A10Q9UBX3 287 aaPredicted RBP17.97■□□□□ 0.47
TPM4-201ENST00000300933 LYNX1G3V0Z9 82 aa17.96■□□□□ 0.47
TPM4-201ENST00000300933 LYNX1P0DP58 116 aa17.96■□□□□ 0.47
TPM4-201ENST00000300933 CDSNQ15517 529 aa17.96■□□□□ 0.47
TPM4-201ENST00000300933 SHISA9B4DS77 424 aa17.96■□□□□ 0.47
TPM4-201ENST00000300933 COL8A2P25067 703 aa17.96■□□□□ 0.47
TPM4-201ENST00000300933 TDRG1Q3Y452 100 aa17.96■□□□□ 0.47
TPM4-201ENST00000300933 KCNIP4Q6PIL6 250 aa17.96■□□□□ 0.47
TPM4-201ENST00000300933 HINT2Q9BX68 163 aa17.96■□□□□ 0.47
TPM4-201ENST00000300933 C15orf62A8K5M9 175 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 RRHO14718 337 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 RPL31P62899 125 aaKnown RBP17.95■□□□□ 0.46
TPM4-201ENST00000300933 BATFQ16520 125 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 DYNLRB1Q9NP97 96 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 HEYLQ9NQ87 328 aaPredicted RBP17.95■□□□□ 0.46
TPM4-201ENST00000300933 IDI2-AS1Q9NZ38 188 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 PGPEP1LA6NFU8 196 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 REG1BP48304 166 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 RBPJQ06330 500 aa17.95■□□□□ 0.46
TPM4-201ENST00000300933 RALYQ9UKM9 306 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms