RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 MUC21A0A0G2JKD1 596 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 MUC21A0A140T8X8 626 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 IGHV4-39P01824 125 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 ZNF883P0CG24 379 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 MUC21Q5SSG8 566 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 LINC00305Q7Z4B0 112 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 TMEM170AQ8WVE7 144 aa4.76□□□□□ -1.65
CPSF2-201ENST00000298875 SIRT4Q9Y6E7 314 aaPredicted RBP4.76□□□□□ -1.65
CPSF2-201ENST00000298875 GFRA3O60609 400 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 TFF2Q03403 129 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 ZNF146Q15072 292 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 C8orf82Q6P1X6 216 aaPredicted RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 GPR146Q96CH1 333 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 C20orf144Q9BQM9 153 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 DLEU1O43261 78 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 PF4P02776 101 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 MFAP4P55083 255 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 PEAR1Q5VY43 1037 aaPredicted RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 BHLHA9Q7RTU4 235 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 LRRC37AA6NMS7 1700 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 NKX2-8O15522 239 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 CEACAM1P13688 526 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 LHX2P50458 406 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 RNASEH2CQ8TDP1 164 aaKnown RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 GTF3AQ92664 365 aaKnown RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 DLX4Q92988 240 aaPredicted RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 EEF1AKMT3Q96AZ1 226 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 ZIC3O60481 467 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 C8orf88P0DMB2 117 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 DCTN5Q9BTE1 182 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 YBX2Q9Y2T7 364 aaKnown RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 TRBV20-1A0A075B6N2 111 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 TRAV12-3A0A0B4J271 114 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 A0A0G2JLM5 398 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 PGLYRP1O75594 196 aaPredicted RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 NDUFA3O95167 84 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 MPV17P39210 176 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 TGIF1Q15583 401 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 ST6GALNAC6Q969X2 333 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 SMIM8Q96KF7 97 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 CCL27Q9Y4X3 112 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 KLF12Q9Y4X4 402 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 CENPVL1A0A0U1RR11 272 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 MOSP00540 346 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 ASAH2BP0C7U1 165 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 C14orf144Q96I85 54 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 JMJD8Q96S16 334 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 CITED1Q99966 193 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 SF3B6Q9Y3B4 125 aaKnown RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 CASP8AP2Q9UKL3 1982 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 SPTAN1Q13813 2472 aaKnown RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 IGHV3OR16-10A0A075B7F0 116 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 IGHV3-48P01763 117 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 TSPOP30536 169 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 FAM106AQ4KMX7 169 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 FAM27BQ5VT28 67 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 OR51G1Q8NGK1 321 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 SPANXB1Q9NS25 103 aaPredicted RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 IGHV1-45A0A0A0MS14 117 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 RBMY1BA6NDE4 496 aaKnown RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 RBMY1EA6NEQ0 496 aaKnown RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 RBMY1DP0C7P1 496 aaKnown RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 RBMY1A1P0DJD3 496 aaKnown RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 RBMY1CP0DJD4 496 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 UBE2V1Q13404 147 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 SHISA5Q8N114 240 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 ZP4Q12836 540 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 ITLN1Q8WWA0 313 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 IFNL4K9M1U5 179 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 NDUFS6O75380 124 aaKnown RBP4.75□□□□□ -1.65
CPSF2-201ENST00000298875 CD69Q07108 199 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 NEGR1Q7Z3B1 354 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 NABP2Q9BQ15 211 aa4.75□□□□□ -1.65
CPSF2-201ENST00000298875 IGHV3-66A0A0C4DH42 116 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 EFNB1P98172 346 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 UNC119Q13432 240 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 C1orf194Q5T5A4 169 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 PPDPFLQ8WWR9 84 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 RALGAPA1Q6GYQ0 2036 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 FGFRL1Q8N441 504 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 MRPS18AQ9NVS2 196 aaKnown RBP4.74□□□□□ -1.65
CPSF2-201ENST00000298875 TNFRSF18Q9Y5U5 241 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 LOC102723996A0A087X1L8 192 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 C5orf66Q9H5L9 145 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 TNFSF13O75888 250 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 ASIPP42127 132 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 CLEC7AQ9BXN2 247 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 AHCTF1Q8WYP5 2266 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 SMCHD1A6NHR9 2005 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 PATE3B3GLJ2 98 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 MGST3O14880 152 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 ORMDL2Q53FV1 153 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 FMC1Q96HJ9 113 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 M0R381 172 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 ACSF3Q4G176 576 aaPredicted RBP4.74□□□□□ -1.65
CPSF2-201ENST00000298875 ZNF658BQ4V348 819 aaPredicted RBP4.74□□□□□ -1.65
CPSF2-201ENST00000298875 PCSK4Q6UW60 755 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 TMEM252Q8N6L7 170 aa4.74□□□□□ -1.65
CPSF2-201ENST00000298875 GPX4P36969 197 aaPredicted RBP4.74□□□□□ -1.65
CPSF2-201ENST00000298875 P2RY4P51582 365 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms