RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 IDI2-AS1Q9NZ38 188 aa20.01■□□□□ 0.79
SPTSSA-201ENST00000298130 F2Z2F3 143 aa20.01■□□□□ 0.79
SPTSSA-201ENST00000298130 ZCCHC24Q8N2G6 241 aaKnown RBP20.01■□□□□ 0.79
SPTSSA-201ENST00000298130 ENY2Q9NPA8 101 aa20.01■□□□□ 0.79
SPTSSA-201ENST00000298130 SRRM4A7MD48 611 aaKnown RBP20■□□□□ 0.79
SPTSSA-201ENST00000298130 GCGP01275 180 aa20■□□□□ 0.79
SPTSSA-201ENST00000298130 OR10J4P0C629 311 aa20■□□□□ 0.79
SPTSSA-201ENST00000298130 DNLZQ5SXM8 178 aa20■□□□□ 0.79
SPTSSA-201ENST00000298130 KLF3P57682 345 aaPredicted RBP20■□□□□ 0.79
SPTSSA-201ENST00000298130 OR52E5Q8NH55 327 aa20■□□□□ 0.79
SPTSSA-201ENST00000298130 ATG101Q9BSB4 218 aa20■□□□□ 0.79
SPTSSA-201ENST00000298130 EREGO14944 169 aa20■□□□□ 0.79
SPTSSA-201ENST00000298130 FOXL1Q12952 345 aa20■□□□□ 0.79
SPTSSA-201ENST00000298130 PSG5Q15238 335 aa20■□□□□ 0.79
SPTSSA-201ENST00000298130 CBLN4Q9NTU7 201 aa20■□□□□ 0.79
SPTSSA-201ENST00000298130 FKBP11Q9NYL4 201 aa20■□□□□ 0.79
SPTSSA-201ENST00000298130 OR51B2Q9Y5P1 312 aa20■□□□□ 0.79
SPTSSA-201ENST00000298130 KALRNO60229 2985 aa19.99■□□□□ 0.79
SPTSSA-201ENST00000298130 HSPE1P61604 102 aaKnown RBP19.99■□□□□ 0.79
SPTSSA-201ENST00000298130 IGKV1OR2-108A0A075B7D4 117 aa19.99■□□□□ 0.79
SPTSSA-201ENST00000298130 MKRN2OSH3BPM6 223 aa19.99■□□□□ 0.79
SPTSSA-201ENST00000298130 IGHV3-48P01763 117 aa19.98■□□□□ 0.79
SPTSSA-201ENST00000298130 CRYBB3P26998 211 aa19.98■□□□□ 0.79
SPTSSA-201ENST00000298130 TMPRSS3P57727 454 aa19.98■□□□□ 0.79
SPTSSA-201ENST00000298130 DOLPP1Q86YN1 238 aa19.98■□□□□ 0.79
SPTSSA-201ENST00000298130 OR10W1Q8NGF6 305 aa19.98■□□□□ 0.79
SPTSSA-201ENST00000298130 ZCCHC14Q8WYQ9 949 aaKnown RBP19.98■□□□□ 0.79
SPTSSA-201ENST00000298130 TP53TG5Q9Y2B4 290 aa19.98■□□□□ 0.79
SPTSSA-201ENST00000298130 RHOBP62745 196 aa19.98■□□□□ 0.79
SPTSSA-201ENST00000298130 FXYD3Q14802 87 aa19.98■□□□□ 0.79
SPTSSA-201ENST00000298130 KRTCAP3Q53RY4 240 aa19.98■□□□□ 0.79
SPTSSA-201ENST00000298130 LOXL4Q96JB6 756 aa19.98■□□□□ 0.79
SPTSSA-201ENST00000298130 MS4A10Q96PG2 267 aa19.98■□□□□ 0.79
SPTSSA-201ENST00000298130 TP53TG3Q9ULZ0 132 aa19.98■□□□□ 0.79
SPTSSA-201ENST00000298130 RIF1Q5UIP0 2472 aaKnown RBP19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 KBTBD11-OT1A0A1B0GTJ5 212 aa19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 ZNF705FA8MVS1 300 aaPredicted RBP19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 ZNF705DP0CH99 300 aaPredicted RBP19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 ZNF705BP0CI00 300 aaPredicted RBP19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 CGB3P0DN86 165 aa19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 CGB7P0DN87 165 aa19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 CD99P14209 185 aa19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 IER3P46695 156 aa19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 PIEZO2Q9H5I5 2752 aa19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 J3QR06 171 aa19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 FTH1P19P0C7X4 201 aa19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 PAX1P15863 534 aa19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 TCL1AP56279 114 aa19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 ERVFC1-1P60608 527 aa19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 TDRG1Q3Y452 100 aa19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 TMEM14BQ9NUH8 114 aa19.97■□□□□ 0.79
SPTSSA-201ENST00000298130 FAM90A9PA6NNJ1 464 aa19.96■□□□□ 0.79
SPTSSA-201ENST00000298130 REG1BP48304 166 aa19.96■□□□□ 0.79
SPTSSA-201ENST00000298130 FAM27E3Q08E93 113 aa19.96■□□□□ 0.79
SPTSSA-201ENST00000298130 RNASE7Q9H1E1 156 aaKnown RBP19.96■□□□□ 0.79
SPTSSA-201ENST00000298130 GCM1Q9NP62 436 aa19.96■□□□□ 0.79
SPTSSA-201ENST00000298130 LHBP01229 141 aa19.96■□□□□ 0.79
SPTSSA-201ENST00000298130 MZT1Q08AG7 82 aa19.96■□□□□ 0.79
SPTSSA-201ENST00000298130 TGIF2LXQ8IUE1 241 aa19.96■□□□□ 0.79
SPTSSA-201ENST00000298130 LINC00869P0C866 280 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 CR1LQ2VPA4 569 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 NDUFAF3Q9BU61 184 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 ASCL3Q9NQ33 180 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 POLR3KQ9Y2Y1 108 aaPredicted RBP19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 PLXNB1O43157 2135 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 TRGV10A0A0A0MS01 117 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 OR7C2O60412 319 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 TMEM249Q2WGJ8 235 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 OR8I2Q8N0Y5 310 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 OR9G1Q8NH87 305 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 NABP2Q9BQ15 211 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 MRPL18Q9H0U6 180 aaKnown RBP19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 IQCJQ1A5X6 159 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 KIAA1644Q3SXP7 199 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 PQLC2Q6ZP29 291 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 NHLRC2Q8NBF2 726 aa19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 EAF1Q96JC9 268 aaPredicted RBP19.95■□□□□ 0.78
SPTSSA-201ENST00000298130 AKAP13Q12802 2813 aa19.94■□□□□ 0.78
SPTSSA-201ENST00000298130 LINC00310P59036 64 aa19.94■□□□□ 0.78
SPTSSA-201ENST00000298130 CCL8P80075 99 aa19.94■□□□□ 0.78
SPTSSA-201ENST00000298130 TNFAIP6P98066 277 aaPredicted RBP19.94■□□□□ 0.78
SPTSSA-201ENST00000298130 OR1L6Q8NGR2 347 aa19.94■□□□□ 0.78
SPTSSA-201ENST00000298130 CMTM2Q8TAZ6 248 aa19.94■□□□□ 0.78
SPTSSA-201ENST00000298130 TRGV8A0A0C4DH27 118 aa19.94■□□□□ 0.78
SPTSSA-201ENST00000298130 OR10J1P30954 320 aa19.94■□□□□ 0.78
SPTSSA-201ENST00000298130 CENPWQ5EE01 88 aa19.94■□□□□ 0.78
SPTSSA-201ENST00000298130 PLEKHA3Q9HB20 300 aa19.94■□□□□ 0.78
SPTSSA-201ENST00000298130 FOXA2Q9Y261 457 aaPredicted RBP19.94■□□□□ 0.78
SPTSSA-201ENST00000298130 A0A1B0GWJ7 208 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 FCN1O00602 326 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 SERF1AO75920 110 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 CT45A6P0DMU7 189 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 CT45A5P0DMU8 189 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 CT45A7P0DMV0 189 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 RAB7AP51149 207 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 NOL4LQ96MY1 436 aaPredicted RBP19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 POLEQ07864 2286 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 NAV3Q8IVL0 2385 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 CCKARP32238 428 aa19.93■□□□□ 0.78
SPTSSA-201ENST00000298130 PRR20EP86478 221 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms