RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 ZNF841Q6ZN19 808 aa13.52□□□□□ -0.24
ARHGEF28-201ENST00000296794 NEU4Q8WWR8 484 aaPredicted RBP13.52□□□□□ -0.24
ARHGEF28-201ENST00000296794 WBP1Q96G27 269 aa13.52□□□□□ -0.24
ARHGEF28-201ENST00000296794 NEU1Q99519 415 aa13.52□□□□□ -0.24
ARHGEF28-201ENST00000296794 SRSF12Q8WXF0 261 aaKnown RBP13.52□□□□□ -0.24
ARHGEF28-201ENST00000296794 KLHDC3Q9BQ90 382 aa13.52□□□□□ -0.24
ARHGEF28-201ENST00000296794 MRPS18CQ9Y3D5 142 aaKnown RBP13.52□□□□□ -0.24
ARHGEF28-201ENST00000296794 SBF1O95248 1867 aa13.52□□□□□ -0.25
ARHGEF28-201ENST00000296794 PLPPR1Q8TBJ4 325 aa13.52□□□□□ -0.25
ARHGEF28-201ENST00000296794 IL36BQ9NZH7 164 aa13.52□□□□□ -0.25
ARHGEF28-201ENST00000296794 KLF7O75840 302 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF28-201ENST00000296794 RPL23P62829 140 aaKnown RBP13.52□□□□□ -0.25
ARHGEF28-201ENST00000296794 SUPT4H1P63272 117 aaKnown RBP13.52□□□□□ -0.25
ARHGEF28-201ENST00000296794 LHFPL1Q86WI0 220 aa13.52□□□□□ -0.25
ARHGEF28-201ENST00000296794 CLEC7AQ9BXN2 247 aa13.52□□□□□ -0.25
ARHGEF28-201ENST00000296794 COL25A1Q9BXS0 654 aaPredicted RBP13.52□□□□□ -0.25
ARHGEF28-201ENST00000296794 CD5P06127 495 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 FCGR2BP31994 310 aaPredicted RBP13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 DNM1P46Q6ZS02 220 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 DOCK6Q96HP0 2047 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 GBF1Q92538 1859 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 DCTN5Q9BTE1 182 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 IGFBP2P18065 325 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 CA7P43166 264 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 FAM166AQ6J272 317 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 AP5S1Q9NUS5 200 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 A0A1W2PS18 150 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 HAX1O00165 279 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 SNCGO76070 127 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 ID3Q02535 119 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 OR4D5Q8NGN0 318 aa13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 RNASE6Q93091 150 aaKnown RBP13.51□□□□□ -0.25
ARHGEF28-201ENST00000296794 GAGE10A6NGK3 116 aa13.5□□□□□ -0.25
ARHGEF28-201ENST00000296794 FBLL1A6NHQ2 334 aaKnown RBP13.5□□□□□ -0.25
ARHGEF28-201ENST00000296794 ATP5IP56385 69 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF28-201ENST00000296794 CTAG1AP78358 180 aa13.5□□□□□ -0.25
ARHGEF28-201ENST00000296794 PSG7Q13046 419 aa13.5□□□□□ -0.25
ARHGEF28-201ENST00000296794 SMAD7O15105 426 aaKnown RBP13.5□□□□□ -0.25
ARHGEF28-201ENST00000296794 EFNA2O43921 213 aa13.5□□□□□ -0.25
ARHGEF28-201ENST00000296794 TMEM186Q96B77 213 aa13.5□□□□□ -0.25
ARHGEF28-201ENST00000296794 EAF1Q96JC9 268 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF28-201ENST00000296794 TMEM106BQ9NUM4 274 aa13.5□□□□□ -0.25
ARHGEF28-201ENST00000296794 MOSP00540 346 aa13.5□□□□□ -0.25
ARHGEF28-201ENST00000296794 UBE2CO00762 179 aa13.5□□□□□ -0.25
ARHGEF28-201ENST00000296794 COMPP49747 757 aaPredicted RBP13.5□□□□□ -0.25
ARHGEF28-201ENST00000296794 DPRXA6NFQ7 191 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 COLCA2A8K830 154 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 BTF3P20290 206 aaKnown RBP13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 LY6EQ16553 131 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 PEAR1Q5VY43 1037 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 ATRXP46100 2492 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 BSPH1Q075Z2 132 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 TMEM78Q5T7P6 136 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 FREM3P0C091 2139 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 HIST1H2BKO60814 126 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 HLA-DRB1P01911 266 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 HIST1H2BJP06899 126 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 HIST1H2BOP23527 126 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 HIST1H2BBP33778 126 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 HIST1H2BDP58876 126 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 HIST1H2BCP62807 126 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 HIST2H2BEQ16778 126 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 LRTM2Q8N967 370 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 HIST1H2BHQ93079 126 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 HIST1H2BNQ99877 126 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 HIST1H2BMQ99879 126 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 LY6DQ14210 128 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 GOLT1AQ6ZVE7 132 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 LINC00305Q7Z4B0 112 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 PNKDQ8N490 385 aa13.49□□□□□ -0.25
ARHGEF28-201ENST00000296794 IFI27L2Q9H2X8 130 aa13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 IGKV1-12A0A0C4DH73 117 aa13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 IGKV1D-12P01611 117 aa13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 C9orf106Q8NAJ2 232 aa13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 FAM168AQ92567 244 aa13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 ARHGEF17Q96PE2 2063 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 CELA3BP08861 270 aa13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 FOXA3P55318 350 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 HBBP68871 147 aa13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 PARD6GQ9BYG4 376 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 TBL2Q9Y4P3 447 aaKnown RBP13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 RLFQ13129 1914 aa13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 HERPUD1Q15011 391 aa13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 ZNF600Q6ZNG1 722 aa13.48□□□□□ -0.25
ARHGEF28-201ENST00000296794 GPX4P36969 197 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 TAS2R60P59551 318 aa13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 FAM106AQ4KMX7 169 aa13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 EBLN2Q6P2I7 272 aa13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 HEPN1Q6WQI6 88 aa13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 OR10AG1Q8NH19 301 aa13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 FAM201AQ5SY85 155 aa13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 WNT10AQ9GZT5 417 aa13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 TRAV24A0A0B4J272 114 aa13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 CD55P08174 381 aa13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 CRYGSP22914 178 aa13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 CREBBPQ92793 2442 aa13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 C1QTNF9BB2RNN3 333 aa13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 MFAP4P55083 255 aa13.47□□□□□ -0.25
ARHGEF28-201ENST00000296794 DLX1P56177 255 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms