RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 MRPL37Q9BZE1 423 aaKnown RBP13.18□□□□□ -0.3
SMAD6-201ENST00000288840 SLC25A10Q9UBX3 287 aaPredicted RBP13.18□□□□□ -0.3
SMAD6-201ENST00000288840 ZNF835Q9Y2P0 537 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 ANKHD1Q8IWZ3 2542 aaKnown RBP13.18□□□□□ -0.3
SMAD6-201ENST00000288840 TRBV6-6A0A0A6YYG2 114 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 FOXH1O75593 365 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 IGLV2-14P01704 120 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 TNFRSF1AP19438 455 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 RANP62826 216 aaKnown RBP13.18□□□□□ -0.3
SMAD6-201ENST00000288840 MIR17HGQ75NE6 70 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 OR1L6Q8NGR2 347 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 NCOR2Q9Y618 2525 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 C15orf62A8K5M9 175 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 NDUFB3O43676 98 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 DDTP30046 118 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 PEAR1Q5VY43 1037 aaPredicted RBP13.18□□□□□ -0.3
SMAD6-201ENST00000288840 CMTM2Q8TAZ6 248 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 ZNF331Q9NQX6 463 aaPredicted RBP13.18□□□□□ -0.3
SMAD6-201ENST00000288840 FKBP11Q9NYL4 201 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 DMRT1Q9Y5R6 373 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 EXPH5Q8NEV8 1989 aa13.18□□□□□ -0.3
SMAD6-201ENST00000288840 IFNL4K9M1U5 179 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 TAS2R45P59539 299 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 FOXC1Q12948 553 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 TREML4Q6UXN2 200 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 TGIF2LYQ8IUE0 185 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 JPT1Q9UK76 154 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 UBE2G1P62253 170 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 PRSS8Q16651 343 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 DBX2Q6ZNG2 339 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 SIGLECL1Q8N7X8 197 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 VN1R17PQ8TDU5 208 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 GATCO43716 136 aaKnown RBP13.17□□□□□ -0.3
SMAD6-201ENST00000288840 DLX1P56177 255 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 C10orf55Q5SWW7 151 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 SFRP2Q96HF1 295 aa13.17□□□□□ -0.3
SMAD6-201ENST00000288840 A0A1B0GW64 132 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 OR4A8P0C604 315 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 IL3RAP26951 378 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 ZNF134P52741 427 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 LURAP1LQ8IV03 231 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 ZNF295-AS1Q8N0V1 137 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 OR1B1Q8NGR6 318 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 CORO2AQ92828 525 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 HES4Q9HCC6 221 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 TRAV1-1A0A0B4J248 108 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 SLC25A17O43808 307 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 GCHFRP30047 84 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 OCC1Q8TAD7 63 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 NABP2Q9BQ15 211 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 KLF2Q9Y5W3 355 aaPredicted RBP13.16□□□□□ -0.3
SMAD6-201ENST00000288840 AMTP48728 403 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 FAM90A1Q86YD7 464 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 PARD6AQ9NPB6 346 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 SLC45A2Q9UMX9 530 aa13.16□□□□□ -0.3
SMAD6-201ENST00000288840 FAM90A27PA6NNH2 459 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 TNXAQ16473 311 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 TMEM183AQ8IXX5 376 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 FLYWCH2Q96CP2 140 aaKnown RBP13.15□□□□□ -0.3
SMAD6-201ENST00000288840 DAZAP1Q96EP5 407 aaKnown RBP13.15□□□□□ -0.3
SMAD6-201ENST00000288840 TBX15Q96SF7 602 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 CBLN4Q9NTU7 201 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 DMDP11532 3685 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 HOXB1P14653 301 aaPredicted RBP13.15□□□□□ -0.3
SMAD6-201ENST00000288840 PKIAP61925 76 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 IQCJQ1A5X6 159 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 CT45A1Q5HYN5 189 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 CT45A3Q8NHU0 189 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 C5orf30Q96GV9 206 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 LOXL4Q96JB6 756 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 TMEM68Q96MH6 324 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 WDR83OSQ9Y284 106 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 ZNF253O75346 499 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 GLRXP35754 106 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 LRRC10Q5BKY1 277 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 UTF1Q5T230 341 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 C11orf53Q8IXP5 236 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 TMEM256Q8N2U0 113 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 OR9G1Q8NH87 305 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 ATG101Q9BSB4 218 aa13.15□□□□□ -0.3
SMAD6-201ENST00000288840 J3QW42 95 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 CA1P00915 261 aaPredicted RBP13.14□□□□□ -0.31
SMAD6-201ENST00000288840 AMBPP02760 352 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 ZNF114Q8NC26 417 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 HSPB9Q9BQS6 159 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 RNASE7Q9H1E1 156 aaKnown RBP13.14□□□□□ -0.31
SMAD6-201ENST00000288840 C11orf1Q9H5F2 150 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 GP6Q9HCN6 339 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 TIMM9Q9Y5J7 89 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 SRRM5B3KS81 715 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 IGKV3-15P01624 115 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 IGKV1-16P04430 117 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 LINC00869P0C866 280 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 PAX6P26367 422 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 RPEL1Q2QD12 228 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 ZNF439Q8NDP4 499 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 OR2T6Q8NHC8 308 aa13.14□□□□□ -0.31
SMAD6-201ENST00000288840 TECRQ9NZ01 308 aaKnown RBP13.14□□□□□ -0.31
SMAD6-201ENST00000288840 C16orf97H3BN30 126 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms