RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CCL8P80075 99 aa15.08■□□□□ 0
PDLIM3-201ENST00000284767 HSD17B10Q99714 261 aaKnown RBP15.08■□□□□ 0
PDLIM3-201ENST00000284767 DERL1Q9BUN8 251 aa15.08■□□□□ 0
PDLIM3-201ENST00000284767 PIEZO1Q92508 2521 aa15.08■□□□□ 0
PDLIM3-201ENST00000284767 IGHV3-7P01780 117 aa15.07■□□□□ 0
PDLIM3-201ENST00000284767 LINC00205P59089 165 aa15.07■□□□□ 0
PDLIM3-201ENST00000284767 RBPJQ06330 500 aa15.07■□□□□ 0
PDLIM3-201ENST00000284767 BTNL3Q6UXE8 466 aa15.07■□□□□ 0
PDLIM3-201ENST00000284767 ZCCHC14Q8WYQ9 949 aaKnown RBP15.07■□□□□ 0
PDLIM3-201ENST00000284767 AURKAIP1Q9NWT8 199 aaPredicted RBP15.07■□□□□ 0
PDLIM3-201ENST00000284767 TRAV9-1A0A075B6T8 112 aa15.07■□□□□ 0
PDLIM3-201ENST00000284767 SELENOVP59797 346 aa15.07■□□□□ 0
PDLIM3-201ENST00000284767 SELENOTP62341 195 aa15.07■□□□□ 0
PDLIM3-201ENST00000284767 ADIPOQQ15848 244 aa15.07■□□□□ 0
PDLIM3-201ENST00000284767 ZNF114Q8NC26 417 aa15.07■□□□□ 0
PDLIM3-201ENST00000284767 CMTM2Q8TAZ6 248 aa15.07■□□□□ 0
PDLIM3-201ENST00000284767 NEUROG1Q92886 237 aa15.07■□□□□ 0
PDLIM3-201ENST00000284767 ATG101Q9BSB4 218 aa15.07■□□□□ 0
PDLIM3-201ENST00000284767 DOCK11Q5JSL3 2073 aa15.06■□□□□ 0
PDLIM3-201ENST00000284767 MARCH11A6NNE9 402 aa15.06■□□□□ 0
PDLIM3-201ENST00000284767 M0QZK8 103 aa15.06■□□□□ 0
PDLIM3-201ENST00000284767 RBFOX2O43251 390 aaKnown RBP eCLIP15.06■□□□□ 0
PDLIM3-201ENST00000284767 LHBP01229 141 aa15.06■□□□□ 0
PDLIM3-201ENST00000284767 OPRK1P41145 380 aa15.06■□□□□ 0
PDLIM3-201ENST00000284767 UCNP55089 124 aa15.06■□□□□ 0
PDLIM3-201ENST00000284767 RPP30P78346 268 aaKnown RBP15.06■□□□□ 0
PDLIM3-201ENST00000284767 AARDQ4LEZ3 155 aa15.06■□□□□ 0
PDLIM3-201ENST00000284767 SPINK9Q5DT21 86 aa15.06■□□□□ 0
PDLIM3-201ENST00000284767 GCSAMLQ5JQS6 135 aa15.06■□□□□ 0
PDLIM3-201ENST00000284767 ADMP35318 185 aa15.06■□□□□ 0
PDLIM3-201ENST00000284767 PAFAH1B2P68402 229 aa15.06■□□□□ 0
PDLIM3-201ENST00000284767 LRBAP50851 2863 aa15.06■□□□□ 0
PDLIM3-201ENST00000284767 NUPR1O60356 82 aa15.05■□□□□ 0
PDLIM3-201ENST00000284767 EDDM3BP56851 147 aa15.05■□□□□ 0
PDLIM3-201ENST00000284767 NUP37Q8NFH4 326 aa15.05■□□□□ 0
PDLIM3-201ENST00000284767 R3HDM4Q96D70 268 aa15.05■□□□□ 0
PDLIM3-201ENST00000284767 QTRT1Q9BXR0 403 aaKnown RBP15.05■□□□□ 0
PDLIM3-201ENST00000284767 DYSFO75923 2080 aa15.05■□□□□ -0
PDLIM3-201ENST00000284767 FAM90A9PA6NNJ1 464 aa15.05■□□□□ -0
PDLIM3-201ENST00000284767 STAG3L2P0CL84 134 aa15.05■□□□□ -0
PDLIM3-201ENST00000284767 STAG3L3P0CL85 134 aa15.05■□□□□ -0
PDLIM3-201ENST00000284767 GRNP28799 593 aaKnown RBP15.05■□□□□ -0
PDLIM3-201ENST00000284767 CFHR2P36980 270 aa15.05■□□□□ -0
PDLIM3-201ENST00000284767 UTF1Q5T230 341 aa15.05■□□□□ -0
PDLIM3-201ENST00000284767 TMEM68Q96MH6 324 aa15.05■□□□□ -0
PDLIM3-201ENST00000284767 TBX15Q96SF7 602 aa15.05■□□□□ -0
PDLIM3-201ENST00000284767 VKORC1Q9BQB6 163 aa15.05■□□□□ -0
PDLIM3-201ENST00000284767 TMEM106BQ9NUM4 274 aa15.05■□□□□ -0
PDLIM3-201ENST00000284767 TRBV20OR9-2A0A075B6H5 130 aa15.04■□□□□ -0
PDLIM3-201ENST00000284767 A0A1B0GUS0 222 aa15.04■□□□□ -0
PDLIM3-201ENST00000284767 PGPEP1LA6NFU8 196 aa15.04■□□□□ -0
PDLIM3-201ENST00000284767 LINC00473A8K010 186 aa15.04■□□□□ -0
PDLIM3-201ENST00000284767 ZNF705FA8MVS1 300 aaPredicted RBP15.04■□□□□ -0
PDLIM3-201ENST00000284767 CXorf1O96002 111 aa15.04■□□□□ -0
PDLIM3-201ENST00000284767 ZNF705DP0CH99 300 aaPredicted RBP15.04■□□□□ -0
PDLIM3-201ENST00000284767 ZNF705BP0CI00 300 aaPredicted RBP15.04■□□□□ -0
PDLIM3-201ENST00000284767 ESDP10768 282 aa15.04■□□□□ -0
PDLIM3-201ENST00000284767 TPPP2P59282 170 aa15.04■□□□□ -0
PDLIM3-201ENST00000284767 OR10G8Q8NGN5 311 aa15.04■□□□□ -0
PDLIM3-201ENST00000284767 FAM90A27PA6NNH2 459 aa15.04■□□□□ -0
PDLIM3-201ENST00000284767 C15orf65H3BRN8 121 aa15.04■□□□□ -0
PDLIM3-201ENST00000284767 FAM90A1Q86YD7 464 aa15.04■□□□□ -0
PDLIM3-201ENST00000284767 IL19Q9UHD0 177 aa15.04■□□□□ -0
PDLIM3-201ENST00000284767 RAI1Q7Z5J4 1906 aaPredicted RBP15.04■□□□□ -0
PDLIM3-201ENST00000284767 ARL14EPLP0DKL9 152 aa15.03■□□□□ -0
PDLIM3-201ENST00000284767 CDSNQ15517 529 aa15.03■□□□□ -0
PDLIM3-201ENST00000284767 TCF23Q7RTU1 214 aa15.03■□□□□ -0
PDLIM3-201ENST00000284767 RNF7Q9UBF6 113 aa15.03■□□□□ -0
PDLIM3-201ENST00000284767 YPEL1O60688 119 aa15.03■□□□□ -0
PDLIM3-201ENST00000284767 HPRT1P00492 218 aa15.03■□□□□ -0
PDLIM3-201ENST00000284767 GATA4P43694 442 aa15.03■□□□□ -0
PDLIM3-201ENST00000284767 TREML4Q6UXN2 200 aa15.03■□□□□ -0
PDLIM3-201ENST00000284767 YPEL2Q96QA6 119 aa15.03■□□□□ -0
PDLIM3-201ENST00000284767 C20orf144Q9BQM9 153 aa15.03■□□□□ -0
PDLIM3-201ENST00000284767 PATZ1Q9HBE1 687 aaKnown RBP15.03■□□□□ -0
PDLIM3-201ENST00000284767 PDLIM3Q53GG5 364 aaPredicted RBP15.02■□□□□ -0
PDLIM3-201ENST00000284767 LINC01560Q8TB33 94 aa15.02■□□□□ -0
PDLIM3-201ENST00000284767 TMEM204Q9BSN7 226 aa15.02■□□□□ -0
PDLIM3-201ENST00000284767 PSG11Q9UQ72 335 aa15.02■□□□□ -0
PDLIM3-201ENST00000284767 OR9G9P0C7N8 305 aa15.02□□□□□ -0.01
PDLIM3-201ENST00000284767 KLRB1Q12918 225 aa15.02□□□□□ -0.01
PDLIM3-201ENST00000284767 TEX43Q6ZNM6 134 aa15.02□□□□□ -0.01
PDLIM3-201ENST00000284767 SDSLQ96GA7 329 aa15.02□□□□□ -0.01
PDLIM3-201ENST00000284767 CCL13Q99616 98 aa15.02□□□□□ -0.01
PDLIM3-201ENST00000284767 IL36BQ9NZH7 164 aa15.02□□□□□ -0.01
PDLIM3-201ENST00000284767 MGST3O14880 152 aa15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 RANP62826 216 aaKnown RBP15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 FAM216BQ8N7L0 139 aa15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 OR52E5Q8NH55 327 aa15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 OCC1Q8TAD7 63 aa15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 SCO2A0A1W2PP80 73 aa15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 DLL1O00548 723 aa15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 CCL21O00585 134 aa15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 G0S2P27469 103 aa15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 RPL29P47914 159 aaKnown RBP15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 ZNF90Q03938 601 aa15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 LY6DQ14210 128 aa15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 LEAP2Q969E1 77 aa15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 MGST2Q99735 147 aa15.01□□□□□ -0.01
PDLIM3-201ENST00000284767 GGTLC1Q9BX51 225 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms