RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 DUSP13Q9UII6 198 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 FZR1Q9UM11 496 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 APCP25054 2843 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 TRAV9-1A0A075B6T8 112 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 TRAV38-1A0A0B4J264 116 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 A0A0G2JNJ9 132 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 LHBP01229 141 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 TFF1P04155 84 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 CGB3P0DN86 165 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 CGB7P0DN87 165 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 EGR1P18146 543 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 EDDM3BP56851 147 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 RAB31Q13636 194 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 C1orf185Q5T7R7 199 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 CST9LP1Q5W188 147 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 Q8TCH9 128 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 CORO2AQ92828 525 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 TMEM18Q96B42 140 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 MGST2Q99735 147 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 TMEM140Q9NV12 185 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 Q9UFV3 132 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 TCF19Q9Y242 345 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 FOXA2Q9Y261 457 aaPredicted RBP10.63□□□□□ -0.71
C9orf3-201ENST00000277198 PXMP4Q9Y6I8 212 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 ARL2-SNX15V9GYD0 113 aa10.63□□□□□ -0.71
C9orf3-201ENST00000277198 KIAA2026Q5HYC2 2103 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 MBD3L4A6NDZ8 208 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-201ENST00000277198 MBD3L3A6NE82 208 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-201ENST00000277198 MBD3L5A6NJ08 208 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-201ENST00000277198 C15orf61A6NNL5 157 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 RRHO14718 337 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 NDUFB4O95168 129 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 MT-CO2P00403 227 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 DDTP30046 118 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 GLRXP35754 106 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 GPX4P36969 197 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-201ENST00000277198 GATA4P43694 442 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 THBS3P49746 956 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 ATP5IP56385 69 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-201ENST00000277198 RPS16P62249 146 aaKnown RBP10.62□□□□□ -0.71
C9orf3-201ENST00000277198 HOXA4Q00056 320 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-201ENST00000277198 POU2AF1Q16633 256 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 MBD3L2Q8NHZ7 208 aaPredicted RBP10.62□□□□□ -0.71
C9orf3-201ENST00000277198 SFXN3Q9BWM7 321 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 MS4A5Q9H3V2 200 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 CALYQ9NYX4 217 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 USF3Q68DE3 2245 aa10.62□□□□□ -0.71
C9orf3-201ENST00000277198 GZMBP10144 247 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 ZNF134P52741 427 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 HSPE1P61604 102 aaKnown RBP10.61□□□□□ -0.71
C9orf3-201ENST00000277198 LBHQ53QV2 105 aaPredicted RBP10.61□□□□□ -0.71
C9orf3-201ENST00000277198 TIMM23BQ5SRD1 257 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 TEPPQ6URK8 271 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 REC114Q7Z4M0 266 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 FAM222BQ8WU58 562 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 RND1Q92730 232 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 SFRP2Q96HF1 295 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 MEGF10Q96KG7 1140 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 NOL4LQ96MY1 436 aaPredicted RBP10.61□□□□□ -0.71
C9orf3-201ENST00000277198 OPN3Q9H1Y3 402 aaPredicted RBP10.61□□□□□ -0.71
C9orf3-201ENST00000277198 FUT9Q9Y231 359 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 LY96Q9Y6Y9 160 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 CHD3Q12873 2000 aaKnown RBP10.61□□□□□ -0.71
C9orf3-201ENST00000277198 POLQO75417 2590 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 RD3LP0DJH9 198 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 ARL14EPLP0DKL9 152 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 RPL29P47914 159 aaKnown RBP10.61□□□□□ -0.71
C9orf3-201ENST00000277198 ATP5G3P48201 142 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 CNN1P51911 297 aaKnown RBP10.61□□□□□ -0.71
C9orf3-201ENST00000277198 RPL15P61313 204 aaKnown RBP10.61□□□□□ -0.71
C9orf3-201ENST00000277198 RHOBP62745 196 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 LTC4SQ16873 150 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 RPL39P5Q59GN2 51 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 GCSAMLQ5JQS6 135 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 SSX9Q7RTT3 188 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 C14orf144Q96I85 54 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 TMEM14BQ9NUH8 114 aa10.61□□□□□ -0.71
C9orf3-201ENST00000277198 INTS1Q8N201 2190 aaKnown RBP10.6□□□□□ -0.71
C9orf3-201ENST00000277198 IGLV3-9A0A075B6K5 115 aa10.6□□□□□ -0.71
C9orf3-201ENST00000277198 KBTBD11-OT1A0A1B0GTJ5 212 aa10.6□□□□□ -0.71
C9orf3-201ENST00000277198 IL3RAP26951 378 aa10.6□□□□□ -0.71
C9orf3-201ENST00000277198 CHRNA7P36544 502 aa10.6□□□□□ -0.71
C9orf3-201ENST00000277198 KLF3P57682 345 aaPredicted RBP10.6□□□□□ -0.71
C9orf3-201ENST00000277198 SSX2Q16385 188 aa10.6□□□□□ -0.71
C9orf3-201ENST00000277198 FAM78BQ5VT40 261 aa10.6□□□□□ -0.71
C9orf3-201ENST00000277198 SLC24A4Q8NFF2 622 aa10.6□□□□□ -0.71
C9orf3-201ENST00000277198 OR2V2Q96R30 315 aa10.6□□□□□ -0.71
C9orf3-201ENST00000277198 LINC00574Q9H8X3 128 aa10.6□□□□□ -0.71
C9orf3-201ENST00000277198 PATZ1Q9HBE1 687 aaKnown RBP10.6□□□□□ -0.71
C9orf3-201ENST00000277198 MDFIC2A0A1B0GVS7 189 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 CRYAAP02489 173 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 DEFA4P12838 97 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 NPY1RP25929 384 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 CHRNB4P30926 498 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 UBE2G2P60604 165 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 C17orf58Q2M2W7 97 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 MIC13Q5XKP0 118 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 ABHD12Q8N2K0 398 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 TMEM37Q8WXS4 190 aa10.59□□□□□ -0.71
C9orf3-201ENST00000277198 C11orf52Q96A22 123 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms