RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 OR2T6Q8NHC8 308 aa11.97□□□□□ -0.49
TMEM47-201ENST00000275954 MLNRO43193 412 aa11.96□□□□□ -0.49
TMEM47-201ENST00000275954 ZNF506Q5JVG8 444 aa11.96□□□□□ -0.49
TMEM47-201ENST00000275954 COLCA1Q6ZS62 124 aa11.96□□□□□ -0.49
TMEM47-201ENST00000275954 PDPNQ86YL7 162 aa11.96□□□□□ -0.49
TMEM47-201ENST00000275954 SNURFLB1AK76 121 aa11.96□□□□□ -0.49
TMEM47-201ENST00000275954 ZNF383Q8NA42 475 aa11.96□□□□□ -0.49
TMEM47-201ENST00000275954 C1orf162Q8NEQ5 155 aaPredicted RBP11.96□□□□□ -0.49
TMEM47-201ENST00000275954 BARX1Q9HBU1 254 aaPredicted RBP11.96□□□□□ -0.49
TMEM47-201ENST00000275954 DENND4AQ7Z401 1863 aa11.96□□□□□ -0.49
TMEM47-201ENST00000275954 SFTPCP11686 197 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 AMTP48728 403 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 C10orf113Q5VZT2 155 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 OR8B3Q8NGG8 313 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 OR8B2Q96RD0 313 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 EML6Q6ZMW3 1958 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 CEP192Q8TEP8 1941 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 ZNF253O75346 499 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 DKK1O94907 266 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 CRYBB3P26998 211 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 FXYD3Q14802 87 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 CLDND2Q8NHS1 167 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 GATAD1Q8WUU5 269 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 NPIPB3Q92617 1050 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 PERPQ96FX8 193 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 PSMG3Q9BT73 122 aaPredicted RBP11.96□□□□□ -0.5
TMEM47-201ENST00000275954 TMUB1Q9BVT8 246 aa11.96□□□□□ -0.5
TMEM47-201ENST00000275954 TRGC1P0CF51 173 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 RPL27AP46776 148 aaKnown RBP11.95□□□□□ -0.5
TMEM47-201ENST00000275954 SRSF4Q08170 494 aaKnown RBP11.95□□□□□ -0.5
TMEM47-201ENST00000275954 OR4A47Q6IF82 309 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 OR5AU1Q8NGC0 362 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 FAM222BQ8WU58 562 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 ANAPC16Q96DE5 110 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 TMEM50AO95807 157 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 SMIM6P0DI80 62 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 OR5I1Q13606 314 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 ZNF146Q15072 292 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 FAM57AQ8TBR7 257 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 PPP1R14DQ9NXH3 145 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 PRRC2AP48634 2157 aaKnown RBP11.95□□□□□ -0.5
TMEM47-201ENST00000275954 IGHV3-35A0A0C4DH35 117 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 SMAD7O15105 426 aaKnown RBP11.95□□□□□ -0.5
TMEM47-201ENST00000275954 CD5P06127 495 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 ATP5G3P48201 142 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 ICAM4Q14773 271 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 MORN2Q502X0 79 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 ASCL4Q6XD76 172 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 STPG3Q8N7X2 389 aa11.95□□□□□ -0.5
TMEM47-201ENST00000275954 LILRB1Q8NHL6 650 aaPredicted RBP11.95□□□□□ -0.5
TMEM47-201ENST00000275954 KBTBD11-OT1A0A1B0GTJ5 212 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 PGPEP1LA6NFU8 196 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 RPL29P47914 159 aaKnown RBP11.94□□□□□ -0.5
TMEM47-201ENST00000275954 RPEL1Q2QD12 228 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 ETFRF1Q6IPR1 90 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 Q6P435 159 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 PCSK4Q6UW60 755 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 AP1S3Q96PC3 154 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 MPDU1O75352 247 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 CSN3P07498 182 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 IGFBP2P18065 325 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 KIAA1644Q3SXP7 199 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 AUP1Q9Y679 476 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 TRAV34A0A0B4J273 112 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 OR9G9P0C7N8 305 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 ERVFRD-1P60508 538 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 RNASEKQ6P5S7 137 aaKnown RBP11.94□□□□□ -0.5
TMEM47-201ENST00000275954 PQLC2Q6ZP29 291 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 NABP2Q9BQ15 211 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 ARHGAP21Q5T5U3 1957 aa11.94□□□□□ -0.5
TMEM47-201ENST00000275954 TRBV23-1A0A0A0MS06 115 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 GNG7O60262 68 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 CD177Q8N6Q3 437 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 COQ2Q96H96 371 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 SAA2-SAA4A0A096LPE2 208 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 ZNF785A8K8V0 405 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 SAA2P0DJI9 122 aaPredicted RBP11.93□□□□□ -0.5
TMEM47-201ENST00000275954 MST1LQ2TV78 715 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 PAXXQ9BUH6 204 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 S4R3C0 116 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 IGKV3-7A0A075B6H7 116 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 ZNF729A6NN14 1252 aaPredicted RBP11.93□□□□□ -0.5
TMEM47-201ENST00000275954 TPPP2P59282 170 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 LYPD6Q86Y78 171 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 OR8I2Q8N0Y5 310 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 MUC15Q8N387 334 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 OR4F17Q8NGA8 305 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 OR1L6Q8NGR2 347 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 Q8WTZ3 238 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 NEUROG1Q92886 237 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 TMEM106BQ9NUM4 274 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 PITPNC1Q9UKF7 332 aa11.93□□□□□ -0.5
TMEM47-201ENST00000275954 MED12LQ86YW9 2145 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 MOSP00540 346 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 RASL11BQ9BPW5 248 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 METTL1Q9UBP6 276 aaKnown RBP11.92□□□□□ -0.5
TMEM47-201ENST00000275954 AKAP13Q12802 2813 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 TMSB15BA0A087X1C1 80 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 COX6B1P14854 86 aa11.92□□□□□ -0.5
TMEM47-201ENST00000275954 DUTP33316 252 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms