RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 RNF212Q495C1 297 aa18.71■□□□□ 0.59
RAB40B-201ENST00000269347 TMEM186Q96B77 213 aa18.71■□□□□ 0.59
RAB40B-201ENST00000269347 TRBV23-1A0A0A0MS06 115 aa18.71■□□□□ 0.59
RAB40B-201ENST00000269347 A0A1W2PPE2 198 aa18.71■□□□□ 0.59
RAB40B-201ENST00000269347 C1orf196B1AJZ1 125 aa18.71■□□□□ 0.59
RAB40B-201ENST00000269347 BCL2P10415 239 aa18.71■□□□□ 0.59
RAB40B-201ENST00000269347 CNTFRP26992 372 aa18.71■□□□□ 0.59
RAB40B-201ENST00000269347 AKR1D1P51857 326 aa18.71■□□□□ 0.59
RAB40B-201ENST00000269347 HABP2Q14520 560 aaPredicted RBP18.71■□□□□ 0.59
RAB40B-201ENST00000269347 KHDC3LQ587J8 217 aa18.71■□□□□ 0.59
RAB40B-201ENST00000269347 LINC00518Q8N0U6 118 aa18.71■□□□□ 0.59
RAB40B-201ENST00000269347 OSR1Q8TAX0 266 aaPredicted RBP18.71■□□□□ 0.59
RAB40B-201ENST00000269347 LHX4Q969G2 390 aa18.71■□□□□ 0.59
RAB40B-201ENST00000269347 PRNDQ9UKY0 176 aa18.71■□□□□ 0.59
RAB40B-201ENST00000269347 PPIAL4CA0A0B4J2A2 164 aa18.7■□□□□ 0.58
RAB40B-201ENST00000269347 H3BQ15 152 aa18.7■□□□□ 0.58
RAB40B-201ENST00000269347 APOA2P02652 100 aa18.7■□□□□ 0.58
RAB40B-201ENST00000269347 PPIAL4GP0DN37 164 aa18.7■□□□□ 0.58
RAB40B-201ENST00000269347 MIC13Q5XKP0 118 aa18.7■□□□□ 0.58
RAB40B-201ENST00000269347 RAB24Q969Q5 203 aa18.7■□□□□ 0.58
RAB40B-201ENST00000269347 FLYWCH2Q96CP2 140 aaKnown RBP18.7■□□□□ 0.58
RAB40B-201ENST00000269347 SLC39A9Q9NUM3 307 aa18.7■□□□□ 0.58
RAB40B-201ENST00000269347 LSM4Q9Y4Z0 139 aaKnown RBP18.7■□□□□ 0.58
RAB40B-201ENST00000269347 SFTPCP11686 197 aa18.69■□□□□ 0.58
RAB40B-201ENST00000269347 COX7A1P24310 79 aa18.69■□□□□ 0.58
RAB40B-201ENST00000269347 FAM90A2PQ658T7 463 aa18.69■□□□□ 0.58
RAB40B-201ENST00000269347 TGIF2LXQ8IUE1 241 aa18.69■□□□□ 0.58
RAB40B-201ENST00000269347 GGTLC1Q9BX51 225 aa18.69■□□□□ 0.58
RAB40B-201ENST00000269347 RAB1BQ9H0U4 201 aa18.69■□□□□ 0.58
RAB40B-201ENST00000269347 PATZ1Q9HBE1 687 aaKnown RBP18.69■□□□□ 0.58
RAB40B-201ENST00000269347 UTP20O75691 2785 aaKnown RBP18.69■□□□□ 0.58
RAB40B-201ENST00000269347 RPL35P42766 123 aaKnown RBP18.69■□□□□ 0.58
RAB40B-201ENST00000269347 SSMEM1Q8WWF3 244 aa18.69■□□□□ 0.58
RAB40B-201ENST00000269347 ZNF257Q9Y2Q1 563 aa18.69■□□□□ 0.58
RAB40B-201ENST00000269347 USP24Q9UPU5 2620 aa18.69■□□□□ 0.58
RAB40B-201ENST00000269347 FSTL3O95633 263 aa18.68■□□□□ 0.58
RAB40B-201ENST00000269347 FAM24BQ8N5W8 94 aa18.68■□□□□ 0.58
RAB40B-201ENST00000269347 WNK2Q9Y3S1 2297 aa18.68■□□□□ 0.58
RAB40B-201ENST00000269347 DLK1P80370 383 aa18.68■□□□□ 0.58
RAB40B-201ENST00000269347 HLA-DRB5Q30154 266 aa18.68■□□□□ 0.58
RAB40B-201ENST00000269347 DTX2Q86UW9 622 aa18.68■□□□□ 0.58
RAB40B-201ENST00000269347 RAB39BQ96DA2 213 aa18.68■□□□□ 0.58
RAB40B-201ENST00000269347 PLEKHA3Q9HB20 300 aa18.68■□□□□ 0.58
RAB40B-201ENST00000269347 NDUFA4L2Q9NRX3 87 aa18.68■□□□□ 0.58
RAB40B-201ENST00000269347 IGKV1OR2-108A0A075B7D4 117 aa18.67■□□□□ 0.58
RAB40B-201ENST00000269347 CTXND1A0A1B0GTU2 59 aa18.67■□□□□ 0.58
RAB40B-201ENST00000269347 C4orf17Q53FE4 359 aa18.67■□□□□ 0.58
RAB40B-201ENST00000269347 OR4C13Q8NGP0 309 aa18.67■□□□□ 0.58
RAB40B-201ENST00000269347 ZNF430Q9H8G1 570 aaPredicted RBP18.67■□□□□ 0.58
RAB40B-201ENST00000269347 ZFYVE26Q68DK2 2539 aa18.67■□□□□ 0.58
RAB40B-201ENST00000269347 OR2C1O95371 312 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 RNASE2P10153 161 aaKnown RBP18.66■□□□□ 0.58
RAB40B-201ENST00000269347 RAB5AP20339 215 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 CD81P60033 236 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 RPP30P78346 268 aaKnown RBP18.66■□□□□ 0.58
RAB40B-201ENST00000269347 BSXQ3C1V8 233 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 FAM71F2Q6NXP2 309 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 PDPNQ86YL7 162 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 LY6G5BQ8NDX9 201 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 OR4P4Q8NGL7 312 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 WASHC3Q9Y3C0 194 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 hCG_1809904A0A1W2PP81 198 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 A0A1W2PR64 198 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 A0A1W2PRV1 198 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 SLC25A17O43808 307 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 ZNF709Q8N972 641 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 C8orf46Q8TAG6 207 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 NEIL1Q96FI4 390 aaPredicted RBP18.66■□□□□ 0.58
RAB40B-201ENST00000269347 NIPSNAP3BQ9BS92 247 aa18.66■□□□□ 0.58
RAB40B-201ENST00000269347 USP9XQ93008 2570 aaPredicted RBP18.65■□□□□ 0.58
RAB40B-201ENST00000269347 IGFBP2P18065 325 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 RAB11AP62491 216 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 RPL8P62917 257 aaKnown RBP18.65■□□□□ 0.58
RAB40B-201ENST00000269347 WT1-ASQ06250 92 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 OR8B3Q8NGG8 313 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 TMEM167AQ8TBQ9 72 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 TVP23CQ96ET8 276 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 OR8B2Q96RD0 313 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 GGACTQ9BVM4 153 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 ENY2Q9NPA8 101 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 SIRT7Q9NRC8 400 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 BUB1B-PAK6H3BSN5 160 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 TAGLN2P37802 199 aaKnown RBP18.65■□□□□ 0.58
RAB40B-201ENST00000269347 FBLN7Q53RD9 439 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 ONECUT1Q9UBC0 465 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 PXMP4Q9Y6I8 212 aa18.65■□□□□ 0.58
RAB40B-201ENST00000269347 CELSR1Q9NYQ6 3014 aa18.64■□□□□ 0.57
RAB40B-201ENST00000269347 ZNF727A8MUV8 499 aa18.64■□□□□ 0.57
RAB40B-201ENST00000269347 ENSAO43768 121 aaKnown RBP18.64■□□□□ 0.57
RAB40B-201ENST00000269347 LY86O95711 162 aa18.64■□□□□ 0.57
RAB40B-201ENST00000269347 ARF6P62330 175 aa18.64■□□□□ 0.57
RAB40B-201ENST00000269347 C19orf35Q6ZS72 473 aa18.64■□□□□ 0.57
RAB40B-201ENST00000269347 PNKDQ8N490 385 aa18.64■□□□□ 0.57
RAB40B-201ENST00000269347 CSMD2Q7Z408 3487 aa18.64■□□□□ 0.57
RAB40B-201ENST00000269347 AGAP20933 346 aa18.64■□□□□ 0.57
RAB40B-201ENST00000269347 CACNA1BQ00975 2339 aa18.64■□□□□ 0.57
RAB40B-201ENST00000269347 KLRD1Q13241 179 aa18.64■□□□□ 0.57
RAB40B-201ENST00000269347 SPATA31B1PQ5VZV4 182 aa18.64■□□□□ 0.57
RAB40B-201ENST00000269347 RUSC1-AS1Q66K80 236 aa18.64■□□□□ 0.57
RAB40B-201ENST00000269347 OR5B3Q8NH48 314 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms