RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 C2orf68Q2NKX9 166 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 MZT2BQ6NZ67 158 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 TTC9CQ8N5M4 171 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 SLC35G3Q8N808 338 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 ZNF491Q8N8L2 437 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 C20orf85Q9H1P6 137 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 GNB4Q9HAV0 340 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 NDUFA4L2Q9NRX3 87 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 C9orf170A2RU37 121 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 NUDT19A8MXV4 375 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 TRGV3P03979 118 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 OR4E1P0C645 316 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 ANXA3P12429 323 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 CDX1P47902 265 aaPredicted RBP9.92□□□□□ -0.82
SS18-202ENST00000269138 TPPP2P59282 170 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 UBE2MP61081 183 aaKnown RBP9.92□□□□□ -0.82
SS18-202ENST00000269138 SPINK9Q5DT21 86 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 C8orf86Q6ZUL3 223 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 LGI3Q8N145 548 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 KLHL30-AS1Q8NEE0 82 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 IL22RA2Q969J5 263 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 OR5B12Q96R08 314 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 NUDT15Q9NV35 164 aa9.92□□□□□ -0.82
SS18-202ENST00000269138 ST8SIA3O43173 380 aa9.91□□□□□ -0.82
SS18-202ENST00000269138 PSMB6P28072 239 aa9.91□□□□□ -0.82
SS18-202ENST00000269138 RAB25P57735 213 aa9.91□□□□□ -0.82
SS18-202ENST00000269138 WT1-ASQ06250 92 aa9.91□□□□□ -0.82
SS18-202ENST00000269138 DHRS2Q13268 280 aa9.91□□□□□ -0.82
SS18-202ENST00000269138 DEFB136Q30KP8 78 aa9.91□□□□□ -0.82
SS18-202ENST00000269138 FAM219AQ8IW50 185 aa9.91□□□□□ -0.82
SS18-202ENST00000269138 OR52B4Q8NGK2 314 aa9.91□□□□□ -0.82
SS18-202ENST00000269138 OR5B3Q8NH48 314 aa9.91□□□□□ -0.82
SS18-202ENST00000269138 DUX3Q96PT4 197 aa9.91□□□□□ -0.82
SS18-202ENST00000269138 FKBP11Q9NYL4 201 aa9.91□□□□□ -0.82
SS18-202ENST00000269138 CACNG5Q9UF02 275 aa9.91□□□□□ -0.82
SS18-202ENST00000269138 VWFP04275 2813 aa9.91□□□□□ -0.82
SS18-202ENST00000269138 TRRAPQ9Y4A5 3859 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 A0A0B4J2A0 478 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 NPIPB5A8MRT5 1133 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 H3BUA1 57 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 IGHV3-11P01762 117 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 HLA-AP01891 365 aaKnown RBP9.9□□□□□ -0.82
SS18-202ENST00000269138 CRYGCP07315 174 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 H2AFB2P0C5Z0 115 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 OR13C7P0DN81 318 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 CTRB1P17538 263 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 HSPE1P61604 102 aaKnown RBP9.9□□□□□ -0.82
SS18-202ENST00000269138 SRPXP78539 464 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 C4orf46Q504U0 113 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 NMSQ5H8A3 153 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 PRR31Q5SQ13 230 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 CTRB2Q6GPI1 263 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 NRARPQ7Z6K4 114 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 LYG2Q86SG7 212 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 ZNF429Q86V71 674 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 LSM10Q969L4 123 aaKnown RBP9.9□□□□□ -0.82
SS18-202ENST00000269138 UBE2E2Q96LR5 201 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 FANCD2OSQ96PS1 177 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 ALX4Q9H161 411 aaPredicted RBP9.9□□□□□ -0.82
SS18-202ENST00000269138 SLA2Q9H6Q3 261 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 SHPKQ9UHJ6 478 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 ZNF257Q9Y2Q1 563 aa9.9□□□□□ -0.82
SS18-202ENST00000269138 WNK1Q9H4A3 2382 aa9.89□□□□□ -0.83
SS18-202ENST00000269138 OR2J3O76001 311 aa9.89□□□□□ -0.83
SS18-202ENST00000269138 BRI3O95415 125 aa9.89□□□□□ -0.83
SS18-202ENST00000269138 RHOGP84095 191 aa9.89□□□□□ -0.83
SS18-202ENST00000269138 ETV3LQ6ZN32 361 aa9.89□□□□□ -0.83
SS18-202ENST00000269138 LRTM2Q8N967 370 aa9.89□□□□□ -0.83
SS18-202ENST00000269138 OR4F17Q8NGA8 305 aa9.89□□□□□ -0.83
SS18-202ENST00000269138 ENKURQ8TC29 256 aa9.89□□□□□ -0.83
SS18-202ENST00000269138 C4orf3Q8WVX3 66 aa9.89□□□□□ -0.83
SS18-202ENST00000269138 RAX2Q96IS3 184 aa9.89□□□□□ -0.83
SS18-202ENST00000269138 OR4F4Q96R69 305 aa9.89□□□□□ -0.83
SS18-202ENST00000269138 SRSF8Q9BRL6 282 aaKnown RBP9.89□□□□□ -0.83
SS18-202ENST00000269138 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.89□□□□□ -0.83
SS18-202ENST00000269138 DMRT1Q9Y5R6 373 aa9.89□□□□□ -0.83
SS18-202ENST00000269138 TRBV9A0A0B4J1U6 114 aa9.88□□□□□ -0.83
SS18-202ENST00000269138 I3L521 148 aa9.88□□□□□ -0.83
SS18-202ENST00000269138 NXPH3O95157 252 aa9.88□□□□□ -0.83
SS18-202ENST00000269138 IFNA17P01571 189 aa9.88□□□□□ -0.83
SS18-202ENST00000269138 HOXB5P09067 269 aa9.88□□□□□ -0.83
SS18-202ENST00000269138 MECP2P51608 486 aaKnown RBP9.88□□□□□ -0.83
SS18-202ENST00000269138 PRCDQ00LT1 54 aa9.88□□□□□ -0.83
SS18-202ENST00000269138 THOC7Q6I9Y2 204 aaKnown RBP9.88□□□□□ -0.83
SS18-202ENST00000269138 SEC22CQ9BRL7 303 aa9.88□□□□□ -0.83
SS18-202ENST00000269138 NDUFB8O95169 186 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 DUS4LO95620 317 aaKnown RBP9.87□□□□□ -0.83
SS18-202ENST00000269138 SULT1A3P0DMM9 295 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 SULT1A4P0DMN0 295 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 SPNP16150 400 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 MFAP2P55001 183 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 DEFA1P59665 94 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 DEFA3P59666 94 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 AARDQ4LEZ3 155 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 C11orf87Q6NUJ2 197 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 TREML4Q6UXN2 200 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 DUSP18Q8NEJ0 188 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 FBXL7Q9UJT9 491 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 IGLV11-55A0A075B6I3 123 aa9.87□□□□□ -0.83
SS18-202ENST00000269138 C13orf42A0A1B0GVH6 325 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms