RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 C21orf140B9A014 251 aa13.83□□□□□ -0.19
SQLE-201ENST00000265896 PDE6DO43924 150 aa13.83□□□□□ -0.19
SQLE-201ENST00000265896 GCGP01275 180 aa13.83□□□□□ -0.19
SQLE-201ENST00000265896 GCHFRP30047 84 aa13.83□□□□□ -0.19
SQLE-201ENST00000265896 KRTDAPP60985 99 aa13.83□□□□□ -0.19
SQLE-201ENST00000265896 ZNF718Q3SXZ3 478 aa13.83□□□□□ -0.19
SQLE-201ENST00000265896 PQLC2Q6ZP29 291 aa13.83□□□□□ -0.19
SQLE-201ENST00000265896 ZBTB34Q8NCN2 500 aa13.83□□□□□ -0.19
SQLE-201ENST00000265896 PARD6GQ9BYG4 376 aaPredicted RBP13.83□□□□□ -0.19
SQLE-201ENST00000265896 MRPL37Q9BZE1 423 aaKnown RBP13.83□□□□□ -0.19
SQLE-201ENST00000265896 SAA2-SAA4A0A096LPE2 208 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 IGHV2OR16-5A0A0B4J2B6 119 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 MKRN2OSH3BPM6 223 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 PLAUP00749 431 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 SAA2P0DJI9 122 aaPredicted RBP13.83□□□□□ -0.2
SQLE-201ENST00000265896 LINC00310P59036 64 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 ACSF3Q4G176 576 aaPredicted RBP13.83□□□□□ -0.2
SQLE-201ENST00000265896 ATOH7Q8N100 152 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 DEFB123Q8N688 67 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 IFI27L2Q9H2X8 130 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 APC2O95996 2303 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 OTOGLQ3ZCN5 2332 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 TRAV5A0A0B4J249 113 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 HPRT1P00492 218 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 PMCHP20382 165 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 TFPI2P48307 235 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 KCNIP2Q9NS61 270 aa13.83□□□□□ -0.2
SQLE-201ENST00000265896 TMEM210A6NLX4 147 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 STAG3L2P0CL84 134 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 STAG3L3P0CL85 134 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 VDAC2P45880 294 aaPredicted RBP13.82□□□□□ -0.2
SQLE-201ENST00000265896 VWC2Q2TAL6 325 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 CT45A1Q5HYN5 189 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 COA6Q5JTJ3 125 aaKnown RBP13.82□□□□□ -0.2
SQLE-201ENST00000265896 OR4A47Q6IF82 309 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 TMEM144Q7Z5S9 345 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 ST6GALNAC3Q8NDV1 305 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 CT45A3Q8NHU0 189 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 PARD6AQ9NPB6 346 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 VENTXO95231 258 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 CRISP2P16562 243 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 ZNF25P17030 456 aaPredicted RBP13.82□□□□□ -0.2
SQLE-201ENST00000265896 FAM19A2Q8N3H0 131 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 ITLN1Q8WWA0 313 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 TP53TG5Q9Y2B4 290 aa13.82□□□□□ -0.2
SQLE-201ENST00000265896 NPY1RP25929 384 aa13.81□□□□□ -0.2
SQLE-201ENST00000265896 PDLIM4P50479 330 aa13.81□□□□□ -0.2
SQLE-201ENST00000265896 INO80CQ6PI98 192 aaPredicted RBP13.81□□□□□ -0.2
SQLE-201ENST00000265896 FAM216BQ8N7L0 139 aa13.81□□□□□ -0.2
SQLE-201ENST00000265896 TMEM178AQ8NBL3 297 aa13.81□□□□□ -0.2
SQLE-201ENST00000265896 CCL13Q99616 98 aa13.81□□□□□ -0.2
SQLE-201ENST00000265896 MAP1AP78559 2803 aaPredicted RBP13.81□□□□□ -0.2
SQLE-201ENST00000265896 TRAV34A0A0B4J273 112 aa13.81□□□□□ -0.2
SQLE-201ENST00000265896 IGKV3-15P01624 115 aa13.81□□□□□ -0.2
SQLE-201ENST00000265896 MORN5Q5VZ52 161 aa13.81□□□□□ -0.2
SQLE-201ENST00000265896 C22orf34Q6ZV56 151 aa13.81□□□□□ -0.2
SQLE-201ENST00000265896 OR9G1Q8NH87 305 aa13.81□□□□□ -0.2
SQLE-201ENST00000265896 CALYQ9NYX4 217 aa13.81□□□□□ -0.2
SQLE-201ENST00000265896 BSNQ9UPA5 3926 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 IGKV1OR2-108A0A075B7D4 117 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 CXorf1O96002 111 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 LGALS4P56470 323 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 LOXL3P58215 753 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 SUMO1P63165 101 aaKnown RBP13.8□□□□□ -0.2
SQLE-201ENST00000265896 ZNF124Q15973 351 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 CENPWQ5EE01 88 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 SLC24A4Q8NFF2 622 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 UHRF2Q96PU4 802 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 C2orf88Q9BSF0 95 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 CLCF1Q9UBD9 225 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 DLX1P56177 255 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 TEPPQ6URK8 271 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 MMD2Q8IY49 270 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 NOL4LQ96MY1 436 aaPredicted RBP13.8□□□□□ -0.2
SQLE-201ENST00000265896 NAT8BQ9UHF3 227 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 SRRM4A7MD48 611 aaKnown RBP13.8□□□□□ -0.2
SQLE-201ENST00000265896 OPRK1P41145 380 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 NUTF2P61970 127 aaKnown RBP13.8□□□□□ -0.2
SQLE-201ENST00000265896 RCHY1Q96PM5 261 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 NPVFQ9HCQ7 196 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 ENY2Q9NPA8 101 aa13.8□□□□□ -0.2
SQLE-201ENST00000265896 TYMSP04818 313 aa13.79□□□□□ -0.2
SQLE-201ENST00000265896 HTD2P86397 168 aa13.79□□□□□ -0.2
SQLE-201ENST00000265896 PRR27Q6MZM9 219 aa13.79□□□□□ -0.2
SQLE-201ENST00000265896 IGHV3-21A0A0B4J1V1 117 aa13.79□□□□□ -0.2
SQLE-201ENST00000265896 H3BTX0 84 aa13.79□□□□□ -0.2
SQLE-201ENST00000265896 IRF2P14316 349 aa13.79□□□□□ -0.2
SQLE-201ENST00000265896 NTF3P20783 257 aa13.79□□□□□ -0.2
SQLE-201ENST00000265896 SSTP61278 116 aa13.79□□□□□ -0.2
SQLE-201ENST00000265896 SSBP2P81877 361 aaPredicted RBP13.79□□□□□ -0.2
SQLE-201ENST00000265896 RPH3ALQ9UNE2 315 aa13.79□□□□□ -0.2
SQLE-201ENST00000265896 PTPRBP23467 1997 aa13.78□□□□□ -0.2
SQLE-201ENST00000265896 SPAARA0A1B0GVQ0 90 aa13.78□□□□□ -0.2
SQLE-201ENST00000265896 C10orf55Q5SWW7 151 aa13.78□□□□□ -0.2
SQLE-201ENST00000265896 PRO3102Q9H379 93 aa13.78□□□□□ -0.2
SQLE-201ENST00000265896 PRSS46E5RG02 174 aa13.78□□□□□ -0.2
SQLE-201ENST00000265896 OR10J1P30954 320 aa13.78□□□□□ -0.2
SQLE-201ENST00000265896 LCN2P80188 198 aa13.78□□□□□ -0.2
SQLE-201ENST00000265896 MRPS11P82912 194 aaKnown RBP13.78□□□□□ -0.2
SQLE-201ENST00000265896 C19orf35Q6ZS72 473 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms