RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 C9orf172C9J069 976 aa11.31□□□□□ -0.6
CNTNAP1-201ENST00000264638 ZP1P60852 638 aa11.31□□□□□ -0.6
CNTNAP1-201ENST00000264638 TM4SF20Q53R12 229 aa11.31□□□□□ -0.6
CNTNAP1-201ENST00000264638 ZG16O60844 167 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 RPRMQ9NS64 109 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 NTN3O00634 580 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 UBE2CO00762 179 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 PLAUP00749 431 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 APELAP0DMC3 54 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 WFDC3Q8IUB2 231 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 OR4X2Q8NGF9 303 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 LINC01560Q8TB33 94 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 PTPRFP10586 1907 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 TRBV20OR9-2A0A075B6H5 130 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 GPR183P32249 361 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 ABHD12Q8N2K0 398 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 TMEM170AQ8WVE7 144 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 ANAPC13Q9BS18 74 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 CLEC7AQ9BXN2 247 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 SDF2L1Q9HCN8 221 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 MARCH11A6NNE9 402 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 ZNF324BQ6AW86 544 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 DNM1P46Q6ZS02 220 aa11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 NEU4Q8WWR8 484 aaPredicted RBP11.3□□□□□ -0.6
CNTNAP1-201ENST00000264638 MFAP4P55083 255 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 ATRAIDQ6UW56 229 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 CCL19Q99731 98 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 ZNF257Q9Y2Q1 563 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 OTOFQ9HC10 1997 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 PATJQ8NI35 1801 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 TMEM14DPA8MWL7 114 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 PF4V1P10720 104 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 CHODLQ9H9P2 273 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 IGHV3-72A0A0B4J1Y9 119 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 FAM27E3Q08E93 113 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 LRTM2Q8N967 370 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 TCF19Q9Y242 345 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 A0A0G2JMZ2 1700 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 LRRC37A2A6NM11 1700 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 CECR9P0C854 216 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 CFHR1Q03591 330 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 ZNF146Q15072 292 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 ST6GALNAC3Q8NDV1 305 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 MRAP2Q96G30 205 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 SSBP3Q9BWW4 388 aaPredicted RBP11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 CCDC88CQ9P219 2028 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 H3BUT2 72 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 RRHO14718 337 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 RAMP1O60894 148 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 SNRPCP09234 159 aaKnown RBP11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 CD59P13987 128 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 TBR1Q16650 682 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 ACSF3Q4G176 576 aaPredicted RBP11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 Q6AWC8 147 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 MEGF9Q9H1U4 602 aa11.29□□□□□ -0.6
CNTNAP1-201ENST00000264638 EP300Q09472 2414 aaPredicted RBP11.28□□□□□ -0.6
CNTNAP1-201ENST00000264638 APOHP02749 345 aaPredicted RBP11.28□□□□□ -0.6
CNTNAP1-201ENST00000264638 THY1P04216 161 aa11.28□□□□□ -0.6
CNTNAP1-201ENST00000264638 FCGR2BP31994 310 aaPredicted RBP11.28□□□□□ -0.6
CNTNAP1-201ENST00000264638 UNQ5815/PRO19632Q6UWF5 114 aa11.28□□□□□ -0.6
CNTNAP1-201ENST00000264638 FLVCR1-AS1Q8TAF5 88 aa11.28□□□□□ -0.6
CNTNAP1-201ENST00000264638 KLK15Q9H2R5 256 aa11.28□□□□□ -0.6
CNTNAP1-201ENST00000264638 LINC00114Q6XXX2 140 aa11.28□□□□□ -0.6
CNTNAP1-201ENST00000264638 OR4C13Q8NGP0 309 aa11.28□□□□□ -0.6
CNTNAP1-201ENST00000264638 TMEM50AO95807 157 aa11.28□□□□□ -0.6
CNTNAP1-201ENST00000264638 C11orf68Q9H3H3 251 aaKnown RBP11.28□□□□□ -0.6
CNTNAP1-201ENST00000264638 FOXA3P55318 350 aaPredicted RBP11.27□□□□□ -0.6
CNTNAP1-201ENST00000264638 IGLV3-32A0A0A0MS00 114 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 TRAV8-2A0A0B4J237 113 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 hCG_38984A0A1B0GV85 526 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 TMEM170BQ5T4T1 132 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 HCP5Q6MZN7 132 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 DDB2Q92466 427 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 SSBP4Q9BWG4 385 aaPredicted RBP11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 RTN4RQ9BZR6 473 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 NRN1Q9NPD7 142 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 TMEM106BQ9NUM4 274 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 ZNF818PQ6ZRF7 136 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 CLDND2Q8NHS1 167 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 LCTP09848 1927 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 TRAV9-2A0A087WT02 112 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 IZUMO1RA6ND01 250 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 GOLT1AQ6ZVE7 132 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 NPCDR1Q9BY65 106 aa11.27□□□□□ -0.61
CNTNAP1-201ENST00000264638 A0A1B0GUT8 65 aa11.26□□□□□ -0.61
CNTNAP1-201ENST00000264638 TSPOP30536 169 aa11.26□□□□□ -0.61
CNTNAP1-201ENST00000264638 TBX6O95947 436 aaPredicted RBP11.26□□□□□ -0.61
CNTNAP1-201ENST00000264638 ST6GALNAC6Q969X2 333 aa11.26□□□□□ -0.61
CNTNAP1-201ENST00000264638 A0A0G2JMM0 328 aa11.26□□□□□ -0.61
CNTNAP1-201ENST00000264638 A0A1W2PPB8 328 aa11.26□□□□□ -0.61
CNTNAP1-201ENST00000264638 A0A1W2PRS3 328 aa11.26□□□□□ -0.61
CNTNAP1-201ENST00000264638 PGPEP1LA6NFU8 196 aa11.26□□□□□ -0.61
CNTNAP1-201ENST00000264638 KIR3DP1A8MWS1 328 aa11.26□□□□□ -0.61
CNTNAP1-201ENST00000264638 LDLRAD4O15165 306 aa11.26□□□□□ -0.61
CNTNAP1-201ENST00000264638 IMMP2LQ96T52 175 aa11.26□□□□□ -0.61
CNTNAP1-201ENST00000264638 C1QTNF5Q9BXJ0 243 aa11.26□□□□□ -0.61
CNTNAP1-201ENST00000264638 IL6RP08887 468 aaPredicted RBP11.25□□□□□ -0.61
CNTNAP1-201ENST00000264638 RRN3P1Q2M238 152 aa11.25□□□□□ -0.61
CNTNAP1-201ENST00000264638 RNASE6Q93091 150 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms