RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 LAMTOR2Q9Y2Q5 125 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 LRRC75BQ2VPJ9 315 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 ACSM6Q6P461 480 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 TEX38Q6PEX7 206 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 ZNRF1Q8ND25 227 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 NAA38Q9BRA0 125 aaKnown RBP13.6□□□□□ -0.23
CTCF-201ENST00000264010 FAM27E3Q08E93 113 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 ZNF506Q5JVG8 444 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 Q6ZRM9 215 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 COQ2Q96H96 371 aa13.6□□□□□ -0.23
CTCF-201ENST00000264010 SRRM5B3KS81 715 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 ZG16O60844 167 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 TMEM50AO95807 157 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 C10orf91Q5T1B1 145 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 Q6ZS92 163 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 RALYQ9UKM9 306 aaKnown RBP13.59□□□□□ -0.23
CTCF-201ENST00000264010 NCKAP5O14513 1909 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 TNFSF13O75888 250 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 LINC00614P0C842 121 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 CEACAM8P31997 349 aaPredicted RBP13.59□□□□□ -0.23
CTCF-201ENST00000264010 FBLN7Q53RD9 439 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 KIAA1549Q9HCM3 1950 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 TRAV38-1A0A0B4J264 116 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 RAMP3O60896 148 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 CBLN1P23435 193 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 TIMP3P35625 211 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 ZNF585BQ52M93 769 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 METRNQ9UJH8 293 aa13.59□□□□□ -0.23
CTCF-201ENST00000264010 CTXND1A0A1B0GTU2 59 aa13.58□□□□□ -0.23
CTCF-201ENST00000264010 CCL13Q99616 98 aa13.58□□□□□ -0.23
CTCF-201ENST00000264010 NUDT3O95989 172 aa13.58□□□□□ -0.24
CTCF-201ENST00000264010 TIGITQ495A1 244 aa13.58□□□□□ -0.24
CTCF-201ENST00000264010 Q6ZR03 302 aa13.58□□□□□ -0.24
CTCF-201ENST00000264010 SLC35E3Q7Z769 313 aa13.58□□□□□ -0.24
CTCF-201ENST00000264010 OR5R1Q8NH85 324 aa13.58□□□□□ -0.24
CTCF-201ENST00000264010 SMIM12Q96EX1 92 aa13.58□□□□□ -0.24
CTCF-201ENST00000264010 MIEN1Q9BRT3 115 aa13.58□□□□□ -0.24
CTCF-201ENST00000264010 TMPRSS2O15393 492 aa13.58□□□□□ -0.24
CTCF-201ENST00000264010 ACTL6BO94805 426 aa13.58□□□□□ -0.24
CTCF-201ENST00000264010 IGLV1-44P01699 117 aa13.58□□□□□ -0.24
CTCF-201ENST00000264010 ZCCHC14Q8WYQ9 949 aaKnown RBP13.58□□□□□ -0.24
CTCF-201ENST00000264010 RNF115Q9Y4L5 304 aa13.58□□□□□ -0.24
CTCF-201ENST00000264010 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.58□□□□□ -0.243e-6■■■□□ 18.9
CTCF-201ENST00000264010 SSX8Q7RTT4 187 aa13.58□□□□□ -0.24
CTCF-201ENST00000264010 CD177Q8N6Q3 437 aa13.58□□□□□ -0.24
CTCF-201ENST00000264010 A0A1B0GW64 132 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 SRP19P09132 144 aaKnown RBP13.57□□□□□ -0.24
CTCF-201ENST00000264010 CD40P25942 277 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 RPL30P62888 115 aaKnown RBP13.57□□□□□ -0.24
CTCF-201ENST00000264010 CCL8P80075 99 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 HES4Q9HCC6 221 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 TRGV8A0A0C4DH27 118 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 A0A1B0GUS0 222 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 NDUFB3O43676 98 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 PAX9P55771 341 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 IGF2-ASQ6U949 168 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 IGFL3Q6UXB1 125 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 FAM19A2Q8N3H0 131 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 OR4B1Q8NGF8 309 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 RCC1LQ96I51 464 aaKnown RBP13.57□□□□□ -0.24
CTCF-201ENST00000264010 HSPB7Q9UBY9 170 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 IGHV2-5P01817 119 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 OR10X1Q8NGY0 326 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 NEIL1Q96FI4 390 aaPredicted RBP13.57□□□□□ -0.24
CTCF-201ENST00000264010 TIMM9Q9Y5J7 89 aa13.57□□□□□ -0.24
CTCF-201ENST00000264010 ACACAQ13085 2346 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 A0A1B0GV72 72 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 C11orf94C9JXX5 98 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 GOSR1O95249 250 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 IGKV1-39P01597 117 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 IGKV1D-39P04432 117 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 LRRC10Q5BKY1 277 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 ZNF474Q6S9Z5 364 aaPredicted RBP13.56□□□□□ -0.24
CTCF-201ENST00000264010 CCL17Q92583 94 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 DAZAP1Q96EP5 407 aaKnown RBP13.56□□□□□ -0.24
CTCF-201ENST00000264010 SAP30LQ9HAJ7 183 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 YPEL1O60688 119 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 SAMD13Q5VXD3 122 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 C19orf35Q6ZS72 473 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 TCF23Q7RTU1 214 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 RNASE8Q8TDE3 154 aaKnown RBP13.56□□□□□ -0.24
CTCF-201ENST00000264010 YPEL2Q96QA6 119 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 PLA2G2EQ9NZK7 142 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 OR10G8Q8NGN5 311 aa13.56□□□□□ -0.24
CTCF-201ENST00000264010 CISD1Q9NZ45 108 aaKnown RBP13.56□□□□□ -0.24
CTCF-201ENST00000264010 WDFY4Q6ZS81 3184 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 FAM201AQ5SY85 155 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 TMEM256Q8N2U0 113 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 CLDND2Q8NHS1 167 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 LYPD6BQ8NI32 183 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 RND1Q92730 232 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 ACY3Q96HD9 319 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 CADP27708 2225 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 MED12LQ86YW9 2145 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 ISLRO14498 428 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 CD1BP29016 333 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 MORN2Q502X0 79 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 WDR73Q6P4I2 378 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 ZDHHC16Q969W1 377 aa13.55□□□□□ -0.24
CTCF-201ENST00000264010 ZFP30Q9Y2G7 519 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms