RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 TUBG2Q9NRH3 451 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 IL36BQ9NZH7 164 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 TP53TG3Q9ULZ0 132 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 TANC2Q9HCD6 1990 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 MT-CO2P00403 227 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 SUMO1P63165 101 aaKnown RBP10.23□□□□□ -0.77
CHMP3-201ENST00000263856 RELBQ01201 579 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 PRR27Q6MZM9 219 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 INO80CQ6PI98 192 aaPredicted RBP10.23□□□□□ -0.77
CHMP3-201ENST00000263856 C1orf229Q6ZS94 237 aaPredicted RBP10.23□□□□□ -0.77
CHMP3-201ENST00000263856 FAM19A2Q8N3H0 131 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 TMEM178AQ8NBL3 297 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 NEU1Q99519 415 aa10.23□□□□□ -0.77
CHMP3-201ENST00000263856 HELTA6NFD8 242 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 C15orf65H3BRN8 121 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 ST6GALNAC3Q8NDV1 305 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 EAF1Q96JC9 268 aaPredicted RBP10.22□□□□□ -0.77
CHMP3-201ENST00000263856 SGK494Q96LW2 274 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 RPH3ALQ9UNE2 315 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 SPTBN2O15020 2390 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 IGKV1D-17A0A075B6S4 117 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 M0R1B8 84 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 MPDU1O75352 247 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 CD99P14209 185 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 PAX1P15863 534 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 TNFSF10P50591 281 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 C21orf62-AS1Q17RA5 79 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 TMEM183BQ1AE95 376 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 HES3Q5TGS1 186 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 OR4A47Q6IF82 309 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 C9orf106Q8NAJ2 232 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 OR2V2Q96R30 315 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 C21orf140B9A014 251 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 ZNF253O75346 499 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 RPLP1P05386 114 aaKnown RBP10.22□□□□□ -0.77
CHMP3-201ENST00000263856 VDAC2P45880 294 aaPredicted RBP10.22□□□□□ -0.77
CHMP3-201ENST00000263856 Q6ZT83 130 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 WNT10AQ9GZT5 417 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 RNF114Q9Y508 228 aa10.22□□□□□ -0.77
CHMP3-201ENST00000263856 LHFPL4Q7Z7J7 247 aa10.21□□□□□ -0.77
CHMP3-201ENST00000263856 OR4S2Q8NH73 311 aa10.21□□□□□ -0.77
CHMP3-201ENST00000263856 RAB1CQ92928 201 aa10.21□□□□□ -0.77
CHMP3-201ENST00000263856 IER2Q9BTL4 223 aa10.21□□□□□ -0.77
CHMP3-201ENST00000263856 CALYQ9NYX4 217 aa10.21□□□□□ -0.77
CHMP3-201ENST00000263856 SAA2-SAA4A0A096LPE2 208 aa10.21□□□□□ -0.78
CHMP3-201ENST00000263856 SAA2P0DJI9 122 aaPredicted RBP10.21□□□□□ -0.78
CHMP3-201ENST00000263856 TIGITQ495A1 244 aa10.21□□□□□ -0.78
CHMP3-201ENST00000263856 DIRC2Q96SL1 478 aa10.21□□□□□ -0.78
CHMP3-201ENST00000263856 GNB4Q9HAV0 340 aa10.21□□□□□ -0.78
CHMP3-201ENST00000263856 TBL2Q9Y4P3 447 aaKnown RBP10.21□□□□□ -0.78
CHMP3-201ENST00000263856 NAV3Q8IVL0 2385 aa10.21□□□□□ -0.78
CHMP3-201ENST00000263856 DSCAMO60469 2012 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 NKX2-8O15522 239 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 NPSP0C0P6 89 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 SRIP30626 198 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 LINC00310P59036 64 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 PPP1R35Q8TAP8 253 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 LINC00479Q96M42 142 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 NABP2Q9BQ15 211 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 IFI27L2Q9H2X8 130 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 OR51B2Q9Y5P1 312 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 KIR2DL5BA0A0G2JN68 375 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 KIR2DL5BA0A0G2JPC4 375 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 DIRC3C9JPN6 131 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 PLAUP00749 431 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 REG1BP48304 166 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 RANP62826 216 aaKnown RBP10.2□□□□□ -0.78
CHMP3-201ENST00000263856 MRPS11P82912 194 aaKnown RBP10.2□□□□□ -0.78
CHMP3-201ENST00000263856 KIR2DL5AQ8N109 375 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 TCTEX1D1Q8N7M0 179 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 WDR31Q8NA23 367 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 SNRNP40Q96DI7 357 aaKnown RBP10.2□□□□□ -0.78
CHMP3-201ENST00000263856 RCHY1Q96PM5 261 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 TXN2Q99757 166 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 ZNF586Q9NXT0 402 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 FBXL7Q9UJT9 491 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 ZNF318Q5VUA4 2279 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 J3QR06 171 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 TDGF1P13385 188 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 ITLN1Q8WWA0 313 aa10.2□□□□□ -0.78
CHMP3-201ENST00000263856 PTPRBP23467 1997 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 MGAQ8IWI9 3026 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 TRAV5A0A0B4J249 113 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 IGHV2OR16-5A0A0B4J2B6 119 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 MGST3O14880 152 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 TPTE2P1Q5T6R2 138 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 GCSAMQ8N6F7 178 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 C1orf159Q96HA4 380 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 SPRY4Q9C004 299 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 JPT1Q9UK76 154 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 TIMM8BQ9Y5J9 83 aaPredicted RBP10.19□□□□□ -0.78
CHMP3-201ENST00000263856 IGHV1-18A0A0C4DH31 117 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 C15orf61A6NNL5 157 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 PRB4P10163 310 aaPredicted RBP10.19□□□□□ -0.78
CHMP3-201ENST00000263856 RAB4AP20338 218 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 KIR2DL2P43627 348 aaPredicted RBP10.19□□□□□ -0.78
CHMP3-201ENST00000263856 LGALS4P56470 323 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 YPEL3P61236 119 aaPredicted RBP10.19□□□□□ -0.78
CHMP3-201ENST00000263856 OR10W1Q8NGF6 305 aa10.19□□□□□ -0.78
CHMP3-201ENST00000263856 OR9G1Q8NH87 305 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms