RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 MORN2Q502X0 79 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 ACTL10Q5JWF8 245 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 CMTM2Q8TAZ6 248 aa10.48□□□□□ -0.73
LIG1-201ENST00000263274 A8MXE2 369 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 M0QZK8 103 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 GGCTO75223 188 aaKnown RBP10.47□□□□□ -0.73
LIG1-201ENST00000263274 VENTXO95231 258 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 IGHV3-48P01763 117 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 ZNF134P52741 427 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 PTTG1IPP53801 180 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 ASPHD1Q5U4P2 390 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 MOB3BQ86TA1 216 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 RNASEH2CQ8TDP1 164 aaKnown RBP10.47□□□□□ -0.73
LIG1-201ENST00000263274 PYGO2Q9BRQ0 406 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 GGTLC1Q9BX51 225 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 NPVFQ9HCQ7 196 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 CXorf1O96002 111 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 CD59P13987 128 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 IGFBP2P18065 325 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 NPY1RP25929 384 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 SPRNQ5BIV9 151 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 C22orf15Q8WYQ4 148 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 KCNIP2Q9NS61 270 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 NAGKQ9UJ70 344 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 POLR3KQ9Y2Y1 108 aaPredicted RBP10.47□□□□□ -0.73
LIG1-201ENST00000263274 PPIAL4AQ9Y536 164 aa10.47□□□□□ -0.73
LIG1-201ENST00000263274 TRBV20OR9-2A0A075B6H5 130 aa10.46□□□□□ -0.73
LIG1-201ENST00000263274 C20orf202A1L168 122 aa10.46□□□□□ -0.73
LIG1-201ENST00000263274 IL6RP08887 468 aaPredicted RBP10.46□□□□□ -0.73
LIG1-201ENST00000263274 CRISP2P16562 243 aa10.46□□□□□ -0.73
LIG1-201ENST00000263274 KIR2DL2P43627 348 aaPredicted RBP10.46□□□□□ -0.73
LIG1-201ENST00000263274 HLA-DRB5Q30154 266 aa10.46□□□□□ -0.73
LIG1-201ENST00000263274 CENPVQ7Z7K6 275 aaPredicted RBP10.46□□□□□ -0.73
LIG1-201ENST00000263274 STPG3Q8N7X2 389 aa10.46□□□□□ -0.73
LIG1-201ENST00000263274 ZNRD1Q9P1U0 126 aa10.46□□□□□ -0.73
LIG1-201ENST00000263274 YTHDF2Q9Y5A9 579 aaKnown RBP10.46□□□□□ -0.73
LIG1-201ENST00000263274 SNURFLB1AK76 121 aa10.46□□□□□ -0.73
LIG1-201ENST00000263274 PEAR1Q5VY43 1037 aaPredicted RBP10.46□□□□□ -0.73
LIG1-201ENST00000263274 TEPPQ6URK8 271 aa10.46□□□□□ -0.73
LIG1-201ENST00000263274 DOLPP1Q86YN1 238 aa10.46□□□□□ -0.73
LIG1-201ENST00000263274 OR8I2Q8N0Y5 310 aa10.46□□□□□ -0.73
LIG1-201ENST00000263274 VN1R17PQ8TDU5 208 aa10.46□□□□□ -0.73
LIG1-201ENST00000263274 PROCRQ9UNN8 238 aa10.46□□□□□ -0.73
LIG1-201ENST00000263274 PLXNB1O43157 2135 aa10.46□□□□□ -0.74
LIG1-201ENST00000263274 CA2P00918 260 aa10.46□□□□□ -0.74
LIG1-201ENST00000263274 FRMD6-AS1P0C7T7 363 aa10.46□□□□□ -0.74
LIG1-201ENST00000263274 CRYBB3P26998 211 aa10.46□□□□□ -0.74
LIG1-201ENST00000263274 GCHFRP30047 84 aa10.46□□□□□ -0.74
LIG1-201ENST00000263274 WDR31Q8NA23 367 aa10.46□□□□□ -0.74
LIG1-201ENST00000263274 NHLRC2Q8NBF2 726 aa10.46□□□□□ -0.74
LIG1-201ENST00000263274 OR1L6Q8NGR2 347 aa10.46□□□□□ -0.74
LIG1-201ENST00000263274 RNASE8Q8TDE3 154 aaKnown RBP10.46□□□□□ -0.74
LIG1-201ENST00000263274 ITLN1Q8WWA0 313 aa10.46□□□□□ -0.74
LIG1-201ENST00000263274 IGHV2OR16-5A0A0B4J2B6 119 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 MT-CO2P00403 227 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 CCKARP32238 428 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 TIMP3P35625 211 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 KRTDAPP60985 99 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 RHOBP62745 196 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 MLANAQ16655 118 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 DEFB109BQ30KR1 87 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 DUX4L9Q6RFH8 374 aaPredicted RBP10.45□□□□□ -0.74
LIG1-201ENST00000263274 MIR17HGQ75NE6 70 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 GBGT1Q8N5D6 347 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 SLC24A4Q8NFF2 622 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 HSPB9Q9BQS6 159 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 NAT8BQ9UHF3 227 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 IGKV1D-17A0A075B6S4 117 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 GFRA3O60609 400 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 P0C879 139 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 C1orf194Q5T5A4 169 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 MRPL54Q6P161 138 aaKnown RBP10.45□□□□□ -0.74
LIG1-201ENST00000263274 Q8TCH9 128 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 MRPL18Q9H0U6 180 aaKnown RBP10.45□□□□□ -0.74
LIG1-201ENST00000263274 CALYQ9NYX4 217 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 MGST3O14880 152 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 SUMO1P63165 101 aaKnown RBP10.45□□□□□ -0.74
LIG1-201ENST00000263274 PRR31Q5SQ13 230 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 OR4S2Q8NH73 311 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 HES4Q9HCC6 221 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 ELOVL5Q9NYP7 299 aa10.45□□□□□ -0.74
LIG1-201ENST00000263274 KMT2EQ8IZD2 1858 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 WNT2P09544 360 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 PMCHP20382 165 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 REG1BP48304 166 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 GAGE1Q13065 139 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 EFNB3Q15768 340 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 PQLC2Q6ZP29 291 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 SARAFQ96BY9 339 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 CCL13Q99616 98 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 IGHV1-18A0A0C4DH31 117 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 C15orf65H3BRN8 121 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 CDX4O14627 284 aaPredicted RBP10.44□□□□□ -0.74
LIG1-201ENST00000263274 OR10J1P30954 320 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 BRS3P32247 399 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 OPRK1P41145 380 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 RAB7AP51149 207 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 LCN2P80188 198 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 OR4A47Q6IF82 309 aa10.44□□□□□ -0.74
LIG1-201ENST00000263274 HSBP1L1C9JCN9 74 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms