RNA–Protein interactions for RNA: ENST00000260777.14

SHTN1-201, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 5,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-201ENST00000260777 GCSHP23434 173 aa13.34□□□□□ -0.27
SHTN1-201ENST00000260777 KCNS1Q96KK3 526 aa13.34□□□□□ -0.27
SHTN1-201ENST00000260777 AUP1Q9Y679 476 aa13.34□□□□□ -0.27
SHTN1-201ENST00000260777 IGKV1D-8A0A087WSZ0 117 aa13.34□□□□□ -0.27
SHTN1-201ENST00000260777 IGHV1-2P23083 117 aa13.34□□□□□ -0.27
SHTN1-201ENST00000260777 PLP1P60201 277 aa13.34□□□□□ -0.27
SHTN1-201ENST00000260777 FDCSPQ8NFU4 85 aa13.34□□□□□ -0.27
SHTN1-201ENST00000260777 IL4P05112 153 aa13.34□□□□□ -0.27
SHTN1-201ENST00000260777 CRYGSP22914 178 aa13.34□□□□□ -0.27
SHTN1-201ENST00000260777 RNASEH2CQ8TDP1 164 aaKnown RBP13.34□□□□□ -0.27
SHTN1-201ENST00000260777 FAM131CQ96AQ9 280 aa13.34□□□□□ -0.27
SHTN1-201ENST00000260777 IMMP2LQ96T52 175 aa13.34□□□□□ -0.27
SHTN1-201ENST00000260777 IGHV3-48P01763 117 aa13.33□□□□□ -0.27
SHTN1-201ENST00000260777 MEF2CQ06413 473 aaPredicted RBP13.33□□□□□ -0.27
SHTN1-201ENST00000260777 ACSF3Q4G176 576 aaPredicted RBP13.33□□□□□ -0.27
SHTN1-201ENST00000260777 CYTL1Q9NRR1 136 aa13.33□□□□□ -0.27
SHTN1-201ENST00000260777 LOC105371242A0A075B767 164 aa13.33□□□□□ -0.28
SHTN1-201ENST00000260777 PNKDQ8N490 385 aa13.33□□□□□ -0.28
SHTN1-201ENST00000260777 FMC1Q96HJ9 113 aa13.33□□□□□ -0.28
SHTN1-201ENST00000260777 PHLDA3Q9Y5J5 127 aa13.33□□□□□ -0.28
SHTN1-201ENST00000260777 GBF1Q92538 1859 aa13.33□□□□□ -0.28
SHTN1-201ENST00000260777 ARF6P62330 175 aa13.33□□□□□ -0.28
SHTN1-201ENST00000260777 FAM166AQ6J272 317 aa13.33□□□□□ -0.28
SHTN1-201ENST00000260777 REG4Q9BYZ8 158 aa13.33□□□□□ -0.28
SHTN1-201ENST00000260777 FBLL1A6NHQ2 334 aaKnown RBP13.33□□□□□ -0.28
SHTN1-201ENST00000260777 GFRA1P56159 465 aa13.33□□□□□ -0.28
SHTN1-201ENST00000260777 ZNF324BQ6AW86 544 aaPredicted RBP13.33□□□□□ -0.28
SHTN1-201ENST00000260777 FAM53AQ6NSI3 398 aaPredicted RBP13.33□□□□□ -0.28
SHTN1-201ENST00000260777 CACNA1IQ9P0X4 2223 aa13.33□□□□□ -0.28
SHTN1-201ENST00000260777 YPEL1O60688 119 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 YPEL2Q96QA6 119 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 HIST1H4GQ99525 98 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 TMEM106BQ9NUM4 274 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 TRAV24A0A0B4J272 114 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 IZUMO1RA6ND01 250 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 CGB1A6NKQ9 187 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 LINC00587B1AMM8 73 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 HERPUD1Q15011 391 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 MIR17HGQ75NE6 70 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 MBD3L1Q8WWY6 194 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 PF4V1P10720 104 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 TMEM144Q7Z5S9 345 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 ATP5G2Q06055 141 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 HEPN1Q6WQI6 88 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 DCTN5Q9BTE1 182 aa13.32□□□□□ -0.28
SHTN1-201ENST00000260777 FOXD3Q9UJU5 478 aaPredicted RBP13.32□□□□□ -0.28
SHTN1-201ENST00000260777 A0A1B0GW64 132 aa13.31□□□□□ -0.28
SHTN1-201ENST00000260777 RBFOX2O43251 390 aaKnown RBP eCLIP13.31□□□□□ -0.281e-6■■■□□ 16.2
SHTN1-201ENST00000260777 RPP21Q9H633 154 aaKnown RBP13.31□□□□□ -0.28
SHTN1-201ENST00000260777 ZSWIM8A7E2V4 1837 aa13.31□□□□□ -0.28
SHTN1-201ENST00000260777 A0A1B0GW15 77 aa13.31□□□□□ -0.28
SHTN1-201ENST00000260777 SUPT4H1P63272 117 aaKnown RBP13.31□□□□□ -0.28
SHTN1-201ENST00000260777 CLEC2AQ6UVW9 174 aa13.31□□□□□ -0.28
SHTN1-201ENST00000260777 OR52E5Q8NH55 327 aa13.31□□□□□ -0.28
SHTN1-201ENST00000260777 EEF1AKMT3Q96AZ1 226 aa13.31□□□□□ -0.28
SHTN1-201ENST00000260777 LINC00312Q9Y6C7 94 aa13.31□□□□□ -0.28
SHTN1-201ENST00000260777 FOXA3P55318 350 aaPredicted RBP13.31□□□□□ -0.28
SHTN1-201ENST00000260777 CCL20P78556 96 aa13.31□□□□□ -0.28
SHTN1-201ENST00000260777 MBNL2Q5VZF2 373 aaKnown RBP13.31□□□□□ -0.28
SHTN1-201ENST00000260777 FAM216BQ8N7L0 139 aa13.31□□□□□ -0.28
SHTN1-201ENST00000260777 TMEM242Q9NWH2 141 aa13.31□□□□□ -0.28
SHTN1-201ENST00000260777 FAM90A9PA6NNJ1 464 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 NPIPB6E9PJ23 425 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 CELA3BP08861 270 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 TMEM136Q6ZRR5 245 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 HIST1H2BKO60814 126 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 HIST1H2BJP06899 126 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 HIST1H2BOP23527 126 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 APOBEC3AP31941 199 aaPredicted RBP13.3□□□□□ -0.28
SHTN1-201ENST00000260777 HIST1H2BBP33778 126 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 HIST1H2BDP58876 126 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 HIST1H2BCP62807 126 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 HIST2H2BEQ16778 126 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.3□□□□□ -0.28
SHTN1-201ENST00000260777 HIST1H2BHQ93079 126 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 HIST1H2BNQ99877 126 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 HIST1H2BMQ99879 126 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 ZNF324O75467 553 aaPredicted RBP13.3□□□□□ -0.28
SHTN1-201ENST00000260777 COX6CP09669 75 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 NPPCP23582 126 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 GLRX5Q86SX6 157 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 PTPRZ1P23471 2315 aaPredicted RBP13.3□□□□□ -0.28
SHTN1-201ENST00000260777 C15orf61A6NNL5 157 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 COLCA2A8K830 154 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 EFNA2O43921 213 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 TNFSF10P50591 281 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 TEX45Q8NA69 505 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 WNT10AQ9GZT5 417 aa13.3□□□□□ -0.28
SHTN1-201ENST00000260777 LOC107984156A0A0G2JMH3 177 aa13.29□□□□□ -0.28
SHTN1-201ENST00000260777 TMPRSS3P57727 454 aa13.29□□□□□ -0.28
SHTN1-201ENST00000260777 SRSF4Q08170 494 aaKnown RBP13.29□□□□□ -0.28
SHTN1-201ENST00000260777 ARL17AQ8IVW1 177 aa13.29□□□□□ -0.28
SHTN1-201ENST00000260777 PEF1Q9UBV8 284 aaKnown RBP13.29□□□□□ -0.28
SHTN1-201ENST00000260777 A1L4Q6 167 aa13.29□□□□□ -0.28
SHTN1-201ENST00000260777 C7orf71A4D174 169 aa13.29□□□□□ -0.28
SHTN1-201ENST00000260777 UPK2O00526 184 aa13.29□□□□□ -0.28
SHTN1-201ENST00000260777 CLPSP04118 112 aa13.29□□□□□ -0.28
SHTN1-201ENST00000260777 Q6AWC8 147 aa13.29□□□□□ -0.28
SHTN1-201ENST00000260777 NABP1Q96AH0 204 aa13.29□□□□□ -0.28
SHTN1-201ENST00000260777 ZNF414Q96IQ9 312 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 149 ms