RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 HIST1H1AQ02539 215 aaPredicted RBP11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 NPDC1Q9NQX5 325 aaPredicted RBP11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 HSPB7Q9UBY9 170 aa11.14□□□□□ -0.63
PRPF38A-201ENST00000257181 GPR183P32249 361 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 INSL4Q14641 139 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 TMEM187Q14656 261 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 TMEM97Q5BJF2 176 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 FAM89BQ8N5H3 189 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 TMEM116Q8NCL8 245 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 CCL3L1P16619 93 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 AANATQ16613 207 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 C5orf64Q2M2E5 130 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 RBFOX3A6NFN3 312 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 TSTD3H0UI37 97 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 EREGO14944 169 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 RPL39P5Q59GN2 51 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 C8orf31Q8N9H6 132 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 ZNF837Q96EG3 531 aaPredicted RBP11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 LINC01619G3V211 115 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 C1QCP02747 245 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 PRCDQ00LT1 54 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 LINC00311Q8N616 119 aa11.13□□□□□ -0.63
PRPF38A-201ENST00000257181 NKX2-5P52952 324 aaPredicted RBP11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 TEX261Q6UWH6 196 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 ZNF818PQ6ZRF7 136 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 Q6ZS49 121 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 KLHDC1Q8N7A1 406 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 MYOZ3Q8TDC0 251 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 PTPRDP23468 1912 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 DOCK4Q8N1I0 1966 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 TEX50A0A1B0GTY4 177 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 MSGN1A6NI15 193 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 DEFB121Q5J5C9 76 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 TAF15Q92804 592 aaKnown RBP eCLIP11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 LINC01587Q99440 93 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 HSBP1O75506 76 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 SAA1P0DJI8 122 aaPredicted RBP11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 UNC119Q13432 240 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 PRNTQ86SH4 94 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 TMEM252Q8N6L7 170 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 VN1R17PQ8TDU5 208 aa11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 ALKBH7Q9BT30 221 aaPredicted RBP11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 MRPS16Q9Y3D3 137 aaKnown RBP11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 URB1O60287 2271 aaKnown RBP11.12□□□□□ -0.63
PRPF38A-201ENST00000257181 OTX1P32242 354 aaPredicted RBP11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 UQCRFS1P47985 274 aa11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 IGHV3OR16-12A0A075B7B8 117 aa11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 MT-ND6P03923 174 aa11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 COL8A2P25067 703 aa11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 HGFACQ04756 655 aa11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 ASCL2Q99929 193 aa11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 V9GYH0 126 aa11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 PMCHP20382 165 aa11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 FAM201AQ5SY85 155 aa11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 NPIPB3Q92617 1050 aa11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 PRSS8Q16651 343 aa11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 ZNF383Q8NA42 475 aa11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 PLPPR1Q8TBJ4 325 aa11.11□□□□□ -0.63
PRPF38A-201ENST00000257181 APELAP0DMC3 54 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 KLHL30-AS1Q8NEE0 82 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 ATG101Q9BSB4 218 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 OR11H12B2RN74 326 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 LEAP2Q969E1 77 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 PEF1Q9UBV8 284 aaKnown RBP11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 SCGB1D1O95968 90 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 C18orf12Q96KH6 178 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 TSSC4Q9Y5U2 329 aaPredicted RBP11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 DKK1O94907 266 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 BSXQ3C1V8 233 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 FAM219BQ5XKK7 198 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 TMEM144Q7Z5S9 345 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 PIP4P2Q8N4L2 257 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 FMC1Q96HJ9 113 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 WFDC6Q9BQY6 131 aa11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 SOX21Q9Y651 276 aaPredicted RBP11.1□□□□□ -0.63
PRPF38A-201ENST00000257181 PIN1P1O15428 100 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 PLXNA2O75051 1894 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 RPL15P61313 204 aaKnown RBP11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 LRP11Q86VZ4 500 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 PGPA6NDG6 321 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 LYNX1G3V0Z9 82 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 C1QL1O75973 258 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 HLA-DRB1P01911 266 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 LYNX1P0DP58 116 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 LYZL4Q96KX0 146 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 FUT9Q9Y231 359 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 IGHV3-21A0A0B4J1V1 117 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 C9orf139Q6ZV77 190 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 FAM110DQ8TAY7 271 aaPredicted RBP11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 PACRGQ96M98 296 aaPredicted RBP11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 NABP2Q9BQ15 211 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 MIXL1Q9H2W2 232 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 OTORQ9NRC9 128 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 NAT8BQ9UHF3 227 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 TRAPPC1Q9Y5R8 145 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 TRAV24A0A0B4J272 114 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 SAA4P35542 130 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 SGK494Q96LW2 274 aa11.09□□□□□ -0.63
PRPF38A-201ENST00000257181 PSPNO60542 156 aa11.08□□□□□ -0.63
PRPF38A-201ENST00000257181 KLK2P20151 261 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms