RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 CCL3P10147 92 aa16.95■□□□□ 0.3
RARA-201ENST00000254066 PQLC2Q6ZP29 291 aa16.95■□□□□ 0.3
RARA-201ENST00000254066 RPS19BP1Q86WX3 136 aaKnown RBP16.95■□□□□ 0.3
RARA-201ENST00000254066 OR4S2Q8NH73 311 aa16.95■□□□□ 0.3
RARA-201ENST00000254066 GALMQ96C23 342 aa16.95■□□□□ 0.3
RARA-201ENST00000254066 MS4A5Q9H3V2 200 aa16.95■□□□□ 0.3
RARA-201ENST00000254066 SH2D2AQ9NP31 389 aa16.95■□□□□ 0.3
RARA-201ENST00000254066 GAGE12BA1L429 117 aa16.95■□□□□ 0.3
RARA-201ENST00000254066 SPINK4O60575 86 aa16.95■□□□□ 0.3
RARA-201ENST00000254066 C5orf30Q96GV9 206 aa16.95■□□□□ 0.3
RARA-201ENST00000254066 B3GALT5-AS1P59052 145 aa16.94■□□□□ 0.3
RARA-201ENST00000254066 RELBQ01201 579 aa16.94■□□□□ 0.3
RARA-201ENST00000254066 IBA57Q5T440 356 aaKnown RBP16.94■□□□□ 0.3
RARA-201ENST00000254066 MRPL54Q6P161 138 aaKnown RBP16.94■□□□□ 0.3
RARA-201ENST00000254066 RNASE7Q9H1E1 156 aaKnown RBP16.94■□□□□ 0.3
RARA-201ENST00000254066 WASHC3Q9Y3C0 194 aa16.94■□□□□ 0.3
RARA-201ENST00000254066 OR2J3O76001 311 aa16.94■□□□□ 0.3
RARA-201ENST00000254066 CEBPDP49716 269 aaPredicted RBP16.94■□□□□ 0.3
RARA-201ENST00000254066 AMMECR1LQ6DCA0 310 aa16.94■□□□□ 0.3
RARA-201ENST00000254066 GGNQ86UU5 652 aa16.94■□□□□ 0.3
RARA-201ENST00000254066 SPACA3Q8IXA5 215 aa16.94■□□□□ 0.3
RARA-201ENST00000254066 FAM222BQ8WU58 562 aa16.94■□□□□ 0.3
RARA-201ENST00000254066 HSD17B10Q99714 261 aaKnown RBP16.94■□□□□ 0.3
RARA-201ENST00000254066 C12orf49Q9H741 205 aa16.94■□□□□ 0.3
RARA-201ENST00000254066 PEF1Q9UBV8 284 aaKnown RBP16.94■□□□□ 0.3
RARA-201ENST00000254066 ZFHX2Q9C0A1 2572 aaPredicted RBP16.93■□□□□ 0.3
RARA-201ENST00000254066 C5orf49A4QMS7 147 aa16.93■□□□□ 0.3
RARA-201ENST00000254066 NUDT3O95989 172 aa16.93■□□□□ 0.3
RARA-201ENST00000254066 SLC25A34Q6PIV7 304 aa16.93■□□□□ 0.3
RARA-201ENST00000254066 OR10W1Q8NGF6 305 aa16.93■□□□□ 0.3
RARA-201ENST00000254066 OR52L2PQ8NGH6 319 aa16.93■□□□□ 0.3
RARA-201ENST00000254066 NEUROG1Q92886 237 aa16.93■□□□□ 0.3
RARA-201ENST00000254066 LINC00470Q9BZP3 86 aa16.93■□□□□ 0.3
RARA-201ENST00000254066 OR2T8A6NH00 312 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 K7ESF4 209 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 CORTO00230 105 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 SCRG1O75711 98 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 CCNOP22674 350 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 GTF3C1Q12789 2109 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 RAB31Q13636 194 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 C5orf64Q2M2E5 130 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 Q6ZS52 159 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 DOLPP1Q86YN1 238 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 TNFRSF19Q9NS68 423 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 MED12Q93074 2177 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 EML6Q6ZMW3 1958 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 TNFSF15O95150 251 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 CRYBB3P26998 211 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 SAMD13Q5VXD3 122 aa16.92■□□□□ 0.3
RARA-201ENST00000254066 CA6P23280 308 aa16.91■□□□□ 0.3
RARA-201ENST00000254066 ZNF146Q15072 292 aa16.91■□□□□ 0.3
RARA-201ENST00000254066 RTL8BQ17RB0 113 aa16.91■□□□□ 0.3
RARA-201ENST00000254066 SPINK9Q5DT21 86 aa16.91■□□□□ 0.3
RARA-201ENST00000254066 TECRQ9NZ01 308 aaKnown RBP16.91■□□□□ 0.3
RARA-201ENST00000254066 OR4C46A6NHA9 309 aa16.91■□□□□ 0.3
RARA-201ENST00000254066 CXCL13O43927 109 aa16.91■□□□□ 0.3
RARA-201ENST00000254066 VDAC2P45880 294 aaPredicted RBP16.91■□□□□ 0.3
RARA-201ENST00000254066 PPOXP50336 477 aa16.91■□□□□ 0.3
RARA-201ENST00000254066 ERVK11-1P61568 191 aa16.91■□□□□ 0.3
RARA-201ENST00000254066 POLDIP2Q9Y2S7 368 aa16.91■□□□□ 0.3
RARA-201ENST00000254066 FAM186AA6NE01 2351 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 LOC102723996A0A087X1L8 192 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 RHBDL1O75783 438 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 TCL1AP56279 114 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 SLC35B1P78383 322 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 FXYD3Q14802 87 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 PCOLCEQ15113 449 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 TEPPQ6URK8 271 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 ZNF808Q8N4W9 903 aaPredicted RBP16.9■□□□□ 0.3
RARA-201ENST00000254066 UBALD1Q8TB05 177 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 CGAP01215 116 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 IGLV2-8P01709 118 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 LGALS7P47929 136 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 SSR4P51571 173 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 PSG9Q00887 426 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 SLC25A40Q8TBP6 338 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 OR2V2Q96R30 315 aa16.9■□□□□ 0.3
RARA-201ENST00000254066 TMEM30CPA0ZSE6 113 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 OOEPA6NGQ2 149 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 FAM231DQ6ZW35 169 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 SYT13Q7L8C5 426 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 STPG3Q8N7X2 389 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 MS4A6AQ9H2W1 248 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 FNDC10F2Z333 226 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 NGFP01138 241 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 IGLC1P0CG04 106 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 SSTR5P35346 364 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 NXPH1P58417 271 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 ARF1P84077 181 aaKnown RBP16.89■□□□□ 0.29
RARA-201ENST00000254066 RNFT1Q5M7Z0 435 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 SHISA2Q6UWI4 295 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 MEGF9Q9H1U4 602 aa16.89■□□□□ 0.29
RARA-201ENST00000254066 HEYLQ9NQ87 328 aaPredicted RBP16.89■□□□□ 0.29
RARA-201ENST00000254066 IGHV1OR15-9A0A0B4J2B8 117 aa16.88■□□□□ 0.29
RARA-201ENST00000254066 FOXH1O75593 365 aa16.88■□□□□ 0.29
RARA-201ENST00000254066 HIST1H1AQ02539 215 aaPredicted RBP16.88■□□□□ 0.29
RARA-201ENST00000254066 SPATA31B1PQ5VZV4 182 aa16.88■□□□□ 0.29
RARA-201ENST00000254066 OR10D3Q8NH80 312 aa16.88■□□□□ 0.29
RARA-201ENST00000254066 C1orf159Q96HA4 380 aa16.88■□□□□ 0.29
RARA-201ENST00000254066 IGF2BP2-AS1Q96M15 143 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms