RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 ZNF57Q68EA5 555 aaPredicted RBP15.85■□□□□ 0.13
NEDD8-201ENST00000250495 OR5AP2Q8NGF4 316 aa15.85■□□□□ 0.13
NEDD8-201ENST00000250495 CD300LFQ8TDQ1 290 aa15.85■□□□□ 0.13
NEDD8-201ENST00000250495 WDR89Q96FK6 387 aaPredicted RBP15.85■□□□□ 0.13
NEDD8-201ENST00000250495 SRSF8Q9BRL6 282 aaKnown RBP15.85■□□□□ 0.13
NEDD8-201ENST00000250495 COMMD5Q9GZQ3 224 aa15.85■□□□□ 0.13
NEDD8-201ENST00000250495 RETNQ9HD89 108 aa15.85■□□□□ 0.13
NEDD8-201ENST00000250495 THYN1Q9P016 225 aa15.85■□□□□ 0.13
NEDD8-201ENST00000250495 A8MWP6 167 aa15.84■□□□□ 0.13
NEDD8-201ENST00000250495 UPK2O00526 184 aa15.84■□□□□ 0.13
NEDD8-201ENST00000250495 UXS1Q8NBZ7 420 aa15.84■□□□□ 0.13
NEDD8-201ENST00000250495 RYR2Q92736 4967 aa15.84■□□□□ 0.13
NEDD8-201ENST00000250495 SACSQ9NZJ4 4579 aa15.83■□□□□ 0.13
NEDD8-201ENST00000250495 TMEM213A2RRL7 107 aa15.83■□□□□ 0.12
NEDD8-201ENST00000250495 CTDSP2O14595 271 aa15.83■□□□□ 0.12
NEDD8-201ENST00000250495 FCER2P06734 321 aa15.83■□□□□ 0.12
NEDD8-201ENST00000250495 FGF2P09038 288 aa15.83■□□□□ 0.12
NEDD8-201ENST00000250495 TNFSF8P32971 234 aa15.83■□□□□ 0.12
NEDD8-201ENST00000250495 ANKRD55Q3KP44 614 aa15.83■□□□□ 0.12
NEDD8-201ENST00000250495 MZT2AQ6P582 158 aa15.83■□□□□ 0.12
NEDD8-201ENST00000250495 ZNF818PQ6ZRF7 136 aa15.83■□□□□ 0.12
NEDD8-201ENST00000250495 CACNG8Q8WXS5 425 aa15.83■□□□□ 0.12
NEDD8-201ENST00000250495 S100A16Q96FQ6 103 aaKnown RBP15.83■□□□□ 0.12
NEDD8-201ENST00000250495 WFDC10AQ9H1F0 79 aa15.83■□□□□ 0.12
NEDD8-201ENST00000250495 PLEKHA2Q9HB19 425 aa15.83■□□□□ 0.12
NEDD8-201ENST00000250495 LYSTQ99698 3801 aa15.82■□□□□ 0.12
NEDD8-201ENST00000250495 STARD9Q9P2P6 4700 aa15.82■□□□□ 0.12
NEDD8-201ENST00000250495 TRAV3A0A0B4J244 114 aa15.82■□□□□ 0.12
NEDD8-201ENST00000250495 CYB5BO43169 146 aa15.82■□□□□ 0.12
NEDD8-201ENST00000250495 XRCC3O43542 346 aa15.82■□□□□ 0.12
NEDD8-201ENST00000250495 PTBP1P26599 531 aaKnown RBP eCLIP15.82■□□□□ 0.127e-6■□□□□ 9.8
NEDD8-201ENST00000250495 HERV-K104P61576 105 aa15.82■□□□□ 0.12
NEDD8-201ENST00000250495 OXA1LQ15070 435 aa15.82■□□□□ 0.12
NEDD8-201ENST00000250495 TMEM61Q8N0U2 210 aa15.82■□□□□ 0.12
NEDD8-201ENST00000250495 CENPSQ8N2Z9 138 aa15.82■□□□□ 0.12
NEDD8-201ENST00000250495 DMBX1Q8NFW5 382 aa15.82■□□□□ 0.12
NEDD8-201ENST00000250495 OR51H1Q8NH63 302 aa15.82■□□□□ 0.12
NEDD8-201ENST00000250495 MARC2Q969Z3 335 aa15.82■□□□□ 0.12
NEDD8-201ENST00000250495 FAM110AQ9BQ89 295 aa15.82■□□□□ 0.12
NEDD8-201ENST00000250495 IGLC7A0M8Q6 106 aa15.81■□□□□ 0.12
NEDD8-201ENST00000250495 MFSD2BA6NFX1 497 aa15.81■□□□□ 0.12
NEDD8-201ENST00000250495 RGS5O15539 181 aa15.81■□□□□ 0.12
NEDD8-201ENST00000250495 AADACL3Q5VUY0 350 aa15.81■□□□□ 0.12
NEDD8-201ENST00000250495 THOC7Q6I9Y2 204 aaKnown RBP15.81■□□□□ 0.12
NEDD8-201ENST00000250495 TMEM17Q86X19 198 aa15.81■□□□□ 0.12
NEDD8-201ENST00000250495 OR52B4Q8NGK2 314 aa15.81■□□□□ 0.12
NEDD8-201ENST00000250495 IFT46Q9NQC8 304 aa15.81■□□□□ 0.12
NEDD8-201ENST00000250495 TMEM140Q9NV12 185 aa15.81■□□□□ 0.12
NEDD8-201ENST00000250495 MLXQ9UH92 298 aa15.81■□□□□ 0.12
NEDD8-201ENST00000250495 TRAV25A0A0B4J276 109 aa15.8■□□□□ 0.12
NEDD8-201ENST00000250495 MEIS3P1A6NDR6 274 aa15.8■□□□□ 0.12
NEDD8-201ENST00000250495 GNRHRP30968 328 aa15.8■□□□□ 0.12
NEDD8-201ENST00000250495 ELLP55199 621 aaPredicted RBP15.8■□□□□ 0.12
NEDD8-201ENST00000250495 IFITM3Q01628 133 aa15.8■□□□□ 0.12
NEDD8-201ENST00000250495 TRIM16LQ309B1 348 aa15.8■□□□□ 0.12
NEDD8-201ENST00000250495 TM4SF20Q53R12 229 aa15.8■□□□□ 0.12
NEDD8-201ENST00000250495 PLET1Q6UQ28 207 aa15.8■□□□□ 0.12
NEDD8-201ENST00000250495 DHRS11Q6UWP2 260 aa15.8■□□□□ 0.12
NEDD8-201ENST00000250495 HSD17B13Q7Z5P4 300 aaPredicted RBP15.8■□□□□ 0.12
NEDD8-201ENST00000250495 ZNF502Q8TBZ5 544 aa15.8■□□□□ 0.12
NEDD8-201ENST00000250495 QTRT1Q9BXR0 403 aaKnown RBP15.8■□□□□ 0.12
NEDD8-201ENST00000250495 MIXL1Q9H2W2 232 aa15.8■□□□□ 0.12
NEDD8-201ENST00000250495 EHFQ9NZC4 300 aa15.8■□□□□ 0.12
NEDD8-201ENST00000250495 COMMD9Q9P000 198 aa15.8■□□□□ 0.12
NEDD8-201ENST00000250495 MRPL27Q9P0M9 148 aaKnown RBP15.8■□□□□ 0.12
NEDD8-201ENST00000250495 V9GYH0 126 aa15.8■□□□□ 0.12
NEDD8-201ENST00000250495 S1PR2O95136 353 aa15.79■□□□□ 0.12
NEDD8-201ENST00000250495 TRAPPC2P0DI81 140 aa15.79■□□□□ 0.12
NEDD8-201ENST00000250495 TRAPPC2BP0DI82 140 aa15.79■□□□□ 0.12
NEDD8-201ENST00000250495 C8orf88P0DMB2 117 aa15.79■□□□□ 0.12
NEDD8-201ENST00000250495 GPR183P32249 361 aa15.79■□□□□ 0.12
NEDD8-201ENST00000250495 ERVK-16P61578 105 aa15.79■□□□□ 0.12
NEDD8-201ENST00000250495 RBPMS2Q6ZRY4 209 aaKnown RBP15.79■□□□□ 0.12
NEDD8-201ENST00000250495 LYSMD2Q8IV50 215 aa15.79■□□□□ 0.12
NEDD8-201ENST00000250495 VN1R17PQ8TDU5 208 aa15.79■□□□□ 0.12
NEDD8-201ENST00000250495 PPP1R14BQ96C90 147 aa15.79■□□□□ 0.12
NEDD8-201ENST00000250495 UFC1Q9Y3C8 167 aa15.79■□□□□ 0.12
NEDD8-201ENST00000250495 SELENOKQ9Y6D0 94 aa15.79■□□□□ 0.12
NEDD8-201ENST00000250495 JTBO76095 146 aa15.78■□□□□ 0.12
NEDD8-201ENST00000250495 SCAF4O95104 1147 aaKnown RBP15.78■□□□□ 0.12
NEDD8-201ENST00000250495 ZNF585BQ52M93 769 aa15.78■□□□□ 0.12
NEDD8-201ENST00000250495 BTNL8Q6UX41 500 aa15.78■□□□□ 0.12
NEDD8-201ENST00000250495 UNQ9165/PRO28630Q6UXU0 137 aa15.78■□□□□ 0.12
NEDD8-201ENST00000250495 OR1L8Q8NGR8 309 aa15.78■□□□□ 0.12
NEDD8-201ENST00000250495 TEX50A0A1B0GTY4 177 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 PTTG1O95997 202 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 SERPINE2P07093 398 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 OR13C7P0DN81 318 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 F2RP25116 425 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 RFX2P48378 723 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 DEFA1P59665 94 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 DEFA3P59666 94 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 UBE2NLQ5JXB2 153 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 SLC25A24Q6NUK1 477 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 GDPD1Q8N9F7 314 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 OR10W1Q8NGF6 305 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 MOB3AQ96BX8 217 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 ZNF2Q9BSG1 426 aaPredicted RBP15.77■□□□□ 0.12
NEDD8-201ENST00000250495 GGTLC1Q9BX51 225 aa15.77■□□□□ 0.12
NEDD8-201ENST00000250495 SRRQ9GZT4 340 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms