RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 DLX4Q92988 240 aaPredicted RBP12.43□□□□□ -0.42
CLPP-201ENST00000245816 MS4A10Q96PG2 267 aa12.43□□□□□ -0.42
CLPP-201ENST00000245816 RTBDNQ9BSG5 229 aaPredicted RBP12.43□□□□□ -0.42
CLPP-201ENST00000245816 ZNF355PQ9NSJ1 428 aa12.43□□□□□ -0.42
CLPP-201ENST00000245816 TRBV9A0A0B4J1U6 114 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 C13orf42A0A1B0GVH6 325 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 FAM223BA6NKX1 122 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 NPIPB5A8MRT5 1133 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 LINC01619G3V211 115 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 MPPED1O15442 326 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 NDUFB6O95139 128 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 AKR1C4P17516 323 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 HLA-GP17693 338 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 BTCP35070 178 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 RPL27AP46776 148 aaKnown RBP12.42□□□□□ -0.42
CLPP-201ENST00000245816 ERVK-16P61578 105 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 KLK9Q2XQG4 91 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 THOC7Q6I9Y2 204 aaKnown RBP12.42□□□□□ -0.42
CLPP-201ENST00000245816 FAM223AQ8IWN6 122 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 C5orf66Q9H5L9 145 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 KLK9Q9UKQ9 250 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 ZNF257Q9Y2Q1 563 aa12.42□□□□□ -0.42
CLPP-201ENST00000245816 IGHV4OR15-8A0A075B7B6 117 aa12.41□□□□□ -0.42
CLPP-201ENST00000245816 A0A087WW49 117 aa12.41□□□□□ -0.42
CLPP-201ENST00000245816 UPK2O00526 184 aa12.41□□□□□ -0.42
CLPP-201ENST00000245816 CRYGCP07315 174 aa12.41□□□□□ -0.42
CLPP-201ENST00000245816 DCTN2Q13561 401 aaKnown RBP12.41□□□□□ -0.42
CLPP-201ENST00000245816 ZNF585BQ52M93 769 aa12.41□□□□□ -0.42
CLPP-201ENST00000245816 DMBX1Q8NFW5 382 aa12.41□□□□□ -0.42
CLPP-201ENST00000245816 ENKURQ8TC29 256 aa12.41□□□□□ -0.42
CLPP-201ENST00000245816 ASCL2Q99929 193 aa12.41□□□□□ -0.42
CLPP-201ENST00000245816 RANGRFQ9HD47 186 aaPredicted RBP12.41□□□□□ -0.42
CLPP-201ENST00000245816 COA4Q9NYJ1 87 aa12.41□□□□□ -0.42
CLPP-201ENST00000245816 SORL1Q92673 2214 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 MARCH11A6NNE9 402 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 TEX22C9J3V5 150 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 B3GALNT1O75752 331 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 S1PR2O95136 353 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 DHFRP00374 187 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 TCRBP04435 133 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 RPA2P15927 270 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 ZNF343Q6P1L6 599 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 SSX9Q7RTT3 188 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 HSD17B13Q7Z5P4 300 aaPredicted RBP12.4□□□□□ -0.42
CLPP-201ENST00000245816 CENPSQ8N2Z9 138 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 NECAP1Q8NC96 275 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 PALMDQ9NP74 551 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 TMEM140Q9NV12 185 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 FLVCR2Q9UPI3 526 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 KCNIP3Q9Y2W7 256 aa12.4□□□□□ -0.42
CLPP-201ENST00000245816 C3orf85A0A1B0GTC6 90 aa12.39□□□□□ -0.43
CLPP-201ENST00000245816 RBMXL2O75526 392 aaKnown RBP12.39□□□□□ -0.43
CLPP-201ENST00000245816 IGHV3-11P01762 117 aa12.39□□□□□ -0.43
CLPP-201ENST00000245816 SERPINE2P07093 398 aa12.39□□□□□ -0.43
CLPP-201ENST00000245816 ZP3P21754 424 aa12.39□□□□□ -0.43
CLPP-201ENST00000245816 LPAR6P43657 344 aa12.39□□□□□ -0.43
CLPP-201ENST00000245816 SGPP2Q8IWX5 399 aa12.39□□□□□ -0.43
CLPP-201ENST00000245816 COMMD5Q9GZQ3 224 aa12.39□□□□□ -0.43
CLPP-201ENST00000245816 NAA60Q9H7X0 242 aa12.39□□□□□ -0.43
CLPP-201ENST00000245816 FKBP11Q9NYL4 201 aa12.39□□□□□ -0.43
CLPP-201ENST00000245816 STARD9Q9P2P6 4700 aa12.39□□□□□ -0.43
CLPP-201ENST00000245816 TRAV6A0A075B6T7 132 aa12.38□□□□□ -0.43
CLPP-201ENST00000245816 CRYM-AS1A6NIL9 109 aa12.38□□□□□ -0.43
CLPP-201ENST00000245816 E7EUB6 86 aa12.38□□□□□ -0.43
CLPP-201ENST00000245816 OVOL1O14753 267 aa12.38□□□□□ -0.43
CLPP-201ENST00000245816 HIST1H1BP16401 226 aaKnown RBP12.38□□□□□ -0.43
CLPP-201ENST00000245816 OR2B8PP59922 312 aa12.38□□□□□ -0.43
CLPP-201ENST00000245816 SP6Q3SY56 376 aa12.38□□□□□ -0.43
CLPP-201ENST00000245816 C10orf55Q5SWW7 151 aa12.38□□□□□ -0.43
CLPP-201ENST00000245816 ZNF429Q86V71 674 aa12.38□□□□□ -0.43
CLPP-201ENST00000245816 FYTTD1Q96QD9 318 aaKnown RBP12.38□□□□□ -0.43
CLPP-201ENST00000245816 ZNF256Q9Y2P7 627 aaPredicted RBP12.38□□□□□ -0.43
CLPP-201ENST00000245816 CSMD3Q7Z407 3707 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 H0Y980 276 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 SNAPC5O75971 98 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 KRASP01116 189 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 H2AFB2P0C5Z0 115 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 CTRB1P17538 263 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 PSMB6P28072 239 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 DEFA5Q01523 94 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 ATP5G2Q06055 141 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 TRIM16LQ309B1 348 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 TMEM128Q5BJH2 165 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 CTRB2Q6GPI1 263 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 PLET1Q6UQ28 207 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 NRARPQ7Z6K4 114 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 HAPLN4Q86UW8 402 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 TMEM230Q96A57 120 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 WWC2-AS2Q96NR7 200 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 TP53RKQ96S44 253 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 QTRT1Q9BXR0 403 aaKnown RBP12.37□□□□□ -0.43
CLPP-201ENST00000245816 C20orf85Q9H1P6 137 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 NUDT15Q9NV35 164 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 PEF1Q9UBV8 284 aaKnown RBP12.37□□□□□ -0.43
CLPP-201ENST00000245816 PRNDQ9UKY0 176 aa12.37□□□□□ -0.43
CLPP-201ENST00000245816 A0A1B0GW64 132 aa12.36□□□□□ -0.43
CLPP-201ENST00000245816 HMX3A6NHT5 357 aa12.36□□□□□ -0.43
CLPP-201ENST00000245816 CGB1A6NKQ9 187 aa12.36□□□□□ -0.43
CLPP-201ENST00000245816 CYB5BO43169 146 aa12.36□□□□□ -0.43
CLPP-201ENST00000245816 ATG12O94817 140 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms