RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 UCP2P55851 309 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 NMSQ5H8A3 153 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 LINC01551Q86U37 167 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 Q8IYB0 196 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 H1FXQ92522 213 aaKnown RBP9.7□□□□□ -0.86
SOX9-201ENST00000245479 SMIM12Q96EX1 92 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 DERL1Q9BUN8 251 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 SSBP3Q9BWW4 388 aaPredicted RBP9.7□□□□□ -0.86
SOX9-201ENST00000245479 TEX50A0A1B0GTY4 177 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 REG1BP48304 166 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 PPOXP50336 477 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 TEPPQ6URK8 271 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 WFDC8Q8IUA0 241 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 TMEM178AQ8NBL3 297 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 ZNRF1Q8ND25 227 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 OR2V2Q96R30 315 aa9.7□□□□□ -0.86
SOX9-201ENST00000245479 A0A0G2JRQ6 117 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 CRYGSP22914 178 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 UBE2V1Q13404 147 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 ZNF324BQ6AW86 544 aaPredicted RBP9.69□□□□□ -0.86
SOX9-201ENST00000245479 DRAM1Q8N682 238 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 SCCPDHQ8NBX0 429 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM216AQ8WUB2 273 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 C20orf144Q9BQM9 153 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 SELENOKQ9Y6D0 94 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 TMEM131Q92545 1883 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 LEPROTL1O95214 131 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 CDKN1AP38936 164 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 MPV17P39210 176 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 LHX2P50458 406 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 B3GALT5-AS1P59052 145 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 PLP1P60201 277 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FOXF2Q12947 444 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 RIPPLY2Q5TAB7 128 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 OCC1Q8TAD7 63 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 RND1Q92730 232 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 RAB37Q96AX2 223 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 MPC1Q9Y5U8 109 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 TRBV9A0A0B4J1U6 114 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A10PA6NDY2 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A18PA6NE21 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A16PA6NEW6 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A20PA6NIJ5 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A8PA6NJQ4 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A7PA6NKC0 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A22PA8MWA6 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A12PA8MX19 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A5PA8MXJ8 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A23PA8MXZ1 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A15PP0C7V4 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A13PP0C7W8 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A14PP0C7W9 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FAM90A24PP0C7X0 464 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 RELBQ01201 579 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 GAGE1Q13065 139 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 CENPWQ5EE01 88 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 SLC25A53Q5H9E4 307 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 FBXW9Q5XUX1 488 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 LRRC29Q8WV35 223 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 NPVFQ9HCQ7 196 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 ANAPC10Q9UM13 185 aa9.69□□□□□ -0.86
SOX9-201ENST00000245479 A6NDN8 102 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 SLC25A5P05141 298 aaKnown RBP9.68□□□□□ -0.86
SOX9-201ENST00000245479 CCL8P80075 99 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 CEACAM21Q3KPI0 293 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 BLNKQ8WV28 456 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 COMMD5Q9GZQ3 224 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 ODAMA1E959 279 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 RAMP3O60896 148 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 MPDU1O75352 247 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 CLDN18P56856 261 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 GCSAMLQ5JQS6 135 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 C1orf174Q8IYL3 243 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 PLPPR1Q8TBJ4 325 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 LOC102723996A0A087X1L8 192 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 LRRC30A6NM36 301 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 J3QT63 122 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 NTN3O00634 580 aaPredicted RBP9.68□□□□□ -0.86
SOX9-201ENST00000245479 AMY1AP04745 511 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 SP9P0CG40 484 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 BTF3P20290 206 aaKnown RBP9.68□□□□□ -0.86
SOX9-201ENST00000245479 NPY1RP25929 384 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 COMPP49747 757 aaPredicted RBP9.68□□□□□ -0.86
SOX9-201ENST00000245479 SPSB4Q96A44 273 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 NUDT11Q96G61 164 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 KCNS1Q96KK3 526 aa9.68□□□□□ -0.86
SOX9-201ENST00000245479 GALR2O43603 387 aaPredicted RBP9.67□□□□□ -0.86
SOX9-201ENST00000245479 ZNF324O75467 553 aaPredicted RBP9.67□□□□□ -0.86
SOX9-201ENST00000245479 RIPPLY3P57055 190 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 POM121L2Q96KW2 1035 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 ELOVL5Q9NYP7 299 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 METRNQ9UJH8 293 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 IGHV3-21A0A0B4J1V1 117 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 A0A1W2PRD5 423 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 A0A1W2PRF3 423 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 A0A1W2PRM7 423 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 ISLRO14498 428 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 SNAI2O43623 268 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 GCHFRP30047 84 aa9.67□□□□□ -0.86
SOX9-201ENST00000245479 FOXA3P55318 350 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms