RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 MARS2Q96GW9 593 aaKnown RBP11.29□□□□□ -0.6
NEK9-201ENST00000238616 NRIP2Q9BQI9 281 aa11.29□□□□□ -0.6
NEK9-201ENST00000238616 APOBEC3AP31941 199 aaPredicted RBP11.29□□□□□ -0.6
NEK9-201ENST00000238616 C1QL1O75973 258 aa11.29□□□□□ -0.6
NEK9-201ENST00000238616 TSPAN7P41732 249 aa11.29□□□□□ -0.6
NEK9-201ENST00000238616 SLC22A18ASQ8N1D0 253 aa11.29□□□□□ -0.6
NEK9-201ENST00000238616 ZG16O60844 167 aa11.29□□□□□ -0.6
NEK9-201ENST00000238616 STAG3L3P0CL85 134 aa11.29□□□□□ -0.6
NEK9-201ENST00000238616 SERF2P84101 59 aa11.29□□□□□ -0.6
NEK9-201ENST00000238616 A0A0G2JLM5 398 aa11.29□□□□□ -0.6
NEK9-201ENST00000238616 ATP5LO75964 103 aa11.29□□□□□ -0.6
NEK9-201ENST00000238616 KLHDC2Q9Y2U9 406 aa11.29□□□□□ -0.6
NEK9-201ENST00000238616 MEF2BQ02080 365 aaPredicted RBP11.29□□□□□ -0.6
NEK9-201ENST00000238616 WNT2BQ93097 391 aa11.29□□□□□ -0.6
NEK9-201ENST00000238616 VSIG8P0DPA2 414 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 NPIPB3Q92617 1050 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 TGIF2-C20orf24A0A0A6YYL0 155 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 ZIC1Q15915 447 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 ZNF385CQ66K41 422 aaPredicted RBP11.28□□□□□ -0.6
NEK9-201ENST00000238616 CA11O75493 328 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 PAX2Q02962 417 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 ZP4Q12836 540 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 HLA-DQA1P01909 254 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 CD24P25063 80 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 SUMO4Q6EEV6 95 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 SLC25A34Q6PIV7 304 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 TNFRSF9Q07011 255 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 RPL39P5Q59GN2 51 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 DENND4CQ5VZ89 1909 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 OGG1O15527 345 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 OR10J3Q5JRS4 329 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 TNRC6AQ8NDV7 1962 aaKnown RBP11.28□□□□□ -0.6
NEK9-201ENST00000238616 B9A039 149 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 IFNL4K9M1U5 179 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 HOXA5P20719 270 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 CENPWQ5EE01 88 aa11.28□□□□□ -0.6
NEK9-201ENST00000238616 A0A1W2PP11 408 aa11.27□□□□□ -0.6
NEK9-201ENST00000238616 AGAP20933 346 aa11.27□□□□□ -0.6
NEK9-201ENST00000238616 UQCR10Q9UDW1 63 aa11.27□□□□□ -0.6
NEK9-201ENST00000238616 CA1P00915 261 aaPredicted RBP11.27□□□□□ -0.6
NEK9-201ENST00000238616 DTX2Q86UW9 622 aa11.27□□□□□ -0.6
NEK9-201ENST00000238616 TMEM167AQ8TBQ9 72 aa11.27□□□□□ -0.6
NEK9-201ENST00000238616 CD33P20138 364 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 PMCHL1Q16048 86 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 ZPLD1Q8TCW7 415 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 FBXL15Q9H469 300 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 FBXL7Q9UJT9 491 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 IGHV3-73A0A0B4J1V6 119 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 LILRA1O75019 489 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 BGLAPP02818 100 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 MEF2CQ06413 473 aaPredicted RBP11.27□□□□□ -0.61
NEK9-201ENST00000238616 DMKNQ6E0U4 476 aaPredicted RBP11.27□□□□□ -0.61
NEK9-201ENST00000238616 SFXN3Q9BWM7 321 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 ADAMTSL3P82987 1691 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 CTDSPLO15194 276 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 GLIPR1P48060 266 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 OR2K2Q8NGT1 345 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 ARPC1AQ92747 370 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 RPL35AP18077 110 aaKnown RBP11.27□□□□□ -0.61
NEK9-201ENST00000238616 LY6DQ14210 128 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 SAMD13Q5VXD3 122 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 OR10S1Q8NGN2 331 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 ST6GALNAC6Q969X2 333 aa11.27□□□□□ -0.61
NEK9-201ENST00000238616 EVI2AP22794 236 aa11.26□□□□□ -0.61
NEK9-201ENST00000238616 TAF15Q92804 592 aaKnown RBP eCLIP11.26□□□□□ -0.61
NEK9-201ENST00000238616 MRPL20Q9BYC9 149 aaKnown RBP11.26□□□□□ -0.61
NEK9-201ENST00000238616 C8orf88P0DMB2 117 aa11.26□□□□□ -0.61
NEK9-201ENST00000238616 C14orf144Q96I85 54 aa11.26□□□□□ -0.61
NEK9-201ENST00000238616 WDFY2Q96P53 400 aa11.26□□□□□ -0.61
NEK9-201ENST00000238616 ZNF107Q9UII5 783 aaPredicted RBP11.26□□□□□ -0.61
NEK9-201ENST00000238616 PEBP1P30086 187 aaKnown RBP11.26□□□□□ -0.61
NEK9-201ENST00000238616 RAG2P55895 527 aa11.26□□□□□ -0.61
NEK9-201ENST00000238616 ZNF106Q9H2Y7 1883 aaKnown RBP11.26□□□□□ -0.61
NEK9-201ENST00000238616 CD300CQ08708 224 aa11.26□□□□□ -0.61
NEK9-201ENST00000238616 PPP1R27Q86WC6 154 aa11.26□□□□□ -0.61
NEK9-201ENST00000238616 TRAV8-2A0A0B4J237 113 aa11.26□□□□□ -0.61
NEK9-201ENST00000238616 IGKV1D-16P01601 117 aa11.26□□□□□ -0.61
NEK9-201ENST00000238616 FOXA3P55318 350 aaPredicted RBP11.26□□□□□ -0.61
NEK9-201ENST00000238616 OR11H12B2RN74 326 aa11.26□□□□□ -0.61
NEK9-201ENST00000238616 PGLYRP1O75594 196 aaPredicted RBP11.26□□□□□ -0.61
NEK9-201ENST00000238616 RPL32P62910 135 aaKnown RBP11.26□□□□□ -0.61
NEK9-201ENST00000238616 OR11H1Q8NG94 326 aa11.26□□□□□ -0.61
NEK9-201ENST00000238616 OR11H2Q8NH07 326 aa11.26□□□□□ -0.61
NEK9-201ENST00000238616 ASAH2BP0C7U1 165 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 FAM27BQ5VT28 67 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 VCX2Q9H322 139 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 CD8AP01732 235 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 RPL34P49207 117 aaKnown RBP11.25□□□□□ -0.61
NEK9-201ENST00000238616 CD300LDQ6UXZ3 194 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 HOGA1Q86XE5 327 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 OR9G1Q8NH87 305 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 WDR34Q96EX3 536 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 DDA1Q9BW61 102 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 SP9P0CG40 484 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 SPCS1Q9Y6A9 102 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 C1QAP02745 245 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 SLC25A2Q9BXI2 301 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 SMIM6P0DI80 62 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 CBLN1P23435 193 aa11.25□□□□□ -0.61
NEK9-201ENST00000238616 SRXN1Q9BYN0 137 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms