RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 M0R3E3 92 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 MLNRO43193 412 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 DEFA4P12838 97 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 PEX7O00628 323 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 HBDP02042 147 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 CCL1P22362 96 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 ZNF585BQ52M93 769 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 ZNF502Q8TBZ5 544 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 SRSF12Q8WXF0 261 aaKnown RBP10.85□□□□□ -0.67
VAMP4-201ENST00000236192 IGKV1-9A0A0C4DH69 117 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 IGHV3-64DA0A0J9YX35 117 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 J3QW42 95 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 WIPI1Q5MNZ9 446 aaPredicted RBP10.85□□□□□ -0.67
VAMP4-201ENST00000236192 HES3Q5TGS1 186 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 DRAM1Q8N682 238 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 AICDAQ9GZX7 198 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 SIP14410 1827 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 A0A1B0GUT8 65 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 F2RL2O00254 374 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 SMIM10L1P0DMW3 83 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 SMIM10Q96HG1 83 aa10.85□□□□□ -0.67
VAMP4-201ENST00000236192 PATJQ8NI35 1801 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 IGKV1D-13A0A0B4J2D9 117 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 IGKV1-13P0DP09 117 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 SRSF6Q13247 344 aaKnown RBP10.84□□□□□ -0.67
VAMP4-201ENST00000236192 C3AR1Q16581 482 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 PRSS8Q16651 343 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 FADS6Q8N9I5 356 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 VGLL1Q99990 258 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
VAMP4-201ENST00000236192 RCHY1Q96PM5 261 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 CCDC144NLQ6NUI1 221 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 FAM222BQ8WU58 562 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 C18orf15Q96N68 181 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 HCFC2Q9Y5Z7 792 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 RALGAPA2Q2PPJ7 1873 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 PATE4P0C8F1 98 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 TMEM95Q3KNT9 176 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 GCSAMLQ5JQS6 135 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 PLPPR2Q96GM1 343 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 DEPPQ9NTK1 212 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 WDR83OSQ9Y284 106 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 KLF12Q9Y4X4 402 aa10.84□□□□□ -0.67
VAMP4-201ENST00000236192 MYLKQ15746 1914 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 MIR17HGQ75NE6 70 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 OR2H1Q9GZK4 316 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 PILRAQ9UKJ1 303 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 PPDPFLQ8WWR9 84 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 SNRNP40Q96DI7 357 aaKnown RBP10.83□□□□□ -0.68
VAMP4-201ENST00000236192 SP9P0CG40 484 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 FOXC2Q99958 501 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 LTBP3Q9NS15 1303 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 ETV2O00321 342 aaPredicted RBP10.83□□□□□ -0.68
VAMP4-201ENST00000236192 PRTN3P24158 256 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 LMO1P25800 156 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 REG1BP48304 166 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 DEFB133Q30KQ1 61 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 TMEM14EPQ6UXP3 125 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 SPTBP11277 2137 aa10.83□□□□□ -0.68
VAMP4-201ENST00000236192 A0A1W2PQM1 296 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 H0Y8X5 98 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 SIVA1O15304 175 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 ATP5LO75964 103 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 FAM27BQ5VT28 67 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 RNF208Q9H0X6 261 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 IL23AQ9NPF7 189 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 CHD3Q12873 2000 aaKnown RBP10.82□□□□□ -0.68
VAMP4-201ENST00000236192 J3QT63 122 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 FHL1Q13642 323 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 CHAC1Q9BUX1 264 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 RPL30P62888 115 aaKnown RBP10.82□□□□□ -0.68
VAMP4-201ENST00000236192 LHFPL4Q7Z7J7 247 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 ABHD12Q8N2K0 398 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 C1QTNF4Q9BXJ3 329 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 FCN3O75636 299 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 MYF5P13349 255 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 DSCR4P56555 118 aaPredicted RBP10.82□□□□□ -0.68
VAMP4-201ENST00000236192 NUP35Q8NFH5 326 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 OR5AN1Q8NGI8 311 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 ARPC1AQ92747 370 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 IFI27L1Q96BM0 104 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 SGK494Q96LW2 274 aa10.82□□□□□ -0.68
VAMP4-201ENST00000236192 DOCK1Q14185 1865 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 DPM2O94777 84 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 IGKCP01834 107 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 CTGFP29279 349 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 SARAFQ96BY9 339 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 FGF21Q9NSA1 209 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 IGKV1D-43A0A0B4J1Z2 117 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 KLRC4-KLRK1H3BQV0 150 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 CXCL13O43927 109 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 ZNF658BQ4V348 819 aaPredicted RBP10.81□□□□□ -0.68
VAMP4-201ENST00000236192 SPEM1Q8N4L4 309 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 WDR31Q8NA23 367 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 A0A1W2PPC4 97 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 DEFB119Q8N690 84 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 ZIC4Q8N9L1 334 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 ELSPBP1Q96BH3 223 aa10.81□□□□□ -0.68
VAMP4-201ENST00000236192 ZNF501Q96CX3 271 aaPredicted RBP10.81□□□□□ -0.68
VAMP4-201ENST00000236192 SCRT1Q9BWW7 348 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms