RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 PDPNQ86YL7 162 aa18.27■□□□□ 0.51
CDX1-201ENST00000231656 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.27■□□□□ 0.51
CDX1-201ENST00000231656 TNFRSF14Q92956 283 aa18.27■□□□□ 0.51
CDX1-201ENST00000231656 PCGF1Q9BSM1 259 aa18.27■□□□□ 0.51
CDX1-201ENST00000231656 PPT1P50897 306 aa18.26■□□□□ 0.51
CDX1-201ENST00000231656 ETV3LQ6ZN32 361 aa18.26■□□□□ 0.51
CDX1-201ENST00000231656 C1orf122Q6ZSJ8 110 aa18.26■□□□□ 0.51
CDX1-201ENST00000231656 KIR3DL3Q8N743 410 aa18.26■□□□□ 0.51
CDX1-201ENST00000231656 MBD3L1Q8WWY6 194 aa18.26■□□□□ 0.51
CDX1-201ENST00000231656 HARBI1Q96MB7 349 aa18.26■□□□□ 0.51
CDX1-201ENST00000231656 LPAR2Q9HBW0 351 aa18.26■□□□□ 0.51
CDX1-201ENST00000231656 A0A096LNT2 108 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 IGHV2-26A0A0B4J1V2 119 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 KBTBD11O94819 623 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 IL3RAP26951 378 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 PRB3Q04118 309 aaPredicted RBP18.25■□□□□ 0.51
CDX1-201ENST00000231656 TGIF2LXQ8IUE1 241 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 LHX4Q969G2 390 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 CCDC168Q8NDH2 2452 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 DNASE2O00115 360 aaPredicted RBP18.25■□□□□ 0.51
CDX1-201ENST00000231656 IGLV1-47P01700 117 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 ELLP55199 621 aaPredicted RBP18.25■□□□□ 0.51
CDX1-201ENST00000231656 PRCDQ00LT1 54 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 ACSM6Q6P461 480 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 PRSS57Q6UWY2 283 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 FLYWCH2Q96CP2 140 aaKnown RBP18.25■□□□□ 0.51
CDX1-201ENST00000231656 RCC1LQ96I51 464 aaKnown RBP18.25■□□□□ 0.51
CDX1-201ENST00000231656 GGACTQ9BVM4 153 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 NPCDR1Q9BY65 106 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 WDR83OSQ9Y284 106 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 KPTNQ9Y664 436 aa18.25■□□□□ 0.51
CDX1-201ENST00000231656 TNCP24821 2201 aa18.24■□□□□ 0.51
CDX1-201ENST00000231656 RBFOX3A6NFN3 312 aa18.24■□□□□ 0.51
CDX1-201ENST00000231656 RAB2AP61019 212 aa18.24■□□□□ 0.51
CDX1-201ENST00000231656 SSX7Q7RTT5 188 aa18.24■□□□□ 0.51
CDX1-201ENST00000231656 KRTAP1-3Q8IUG1 177 aa18.24■□□□□ 0.51
CDX1-201ENST00000231656 RARRES2Q99969 163 aa18.24■□□□□ 0.51
CDX1-201ENST00000231656 SMDT1Q9H4I9 107 aa18.24■□□□□ 0.51
CDX1-201ENST00000231656 SIRT7Q9NRC8 400 aa18.24■□□□□ 0.51
CDX1-201ENST00000231656 WASHC3Q9Y3C0 194 aa18.24■□□□□ 0.51
CDX1-201ENST00000231656 SVEP1Q4LDE5 3571 aa18.24■□□□□ 0.51
CDX1-201ENST00000231656 TEX50A0A1B0GTY4 177 aa18.23■□□□□ 0.51
CDX1-201ENST00000231656 IGKV1D-33P01593 117 aa18.23■□□□□ 0.51
CDX1-201ENST00000231656 IGKV1-33P01594 117 aa18.23■□□□□ 0.51
CDX1-201ENST00000231656 PRTN3P24158 256 aa18.23■□□□□ 0.51
CDX1-201ENST00000231656 CD1BP29016 333 aa18.23■□□□□ 0.51
CDX1-201ENST00000231656 RAB11AP62491 216 aa18.23■□□□□ 0.51
CDX1-201ENST00000231656 SLC24A4Q8NFF2 622 aa18.23■□□□□ 0.51
CDX1-201ENST00000231656 OR4C13Q8NGP0 309 aa18.23■□□□□ 0.51
CDX1-201ENST00000231656 CLEC7AQ9BXN2 247 aa18.23■□□□□ 0.51
CDX1-201ENST00000231656 ENY2Q9NPA8 101 aa18.23■□□□□ 0.51
CDX1-201ENST00000231656 FKBP11Q9NYL4 201 aa18.23■□□□□ 0.51
CDX1-201ENST00000231656 SNAPINO95295 136 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 NPY1RP25929 384 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 PRRX1P54821 245 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 DLK1P80370 383 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 HNF4GQ14541 408 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 HLA-DRB5Q30154 266 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 SIRPDQ9H106 197 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.22■□□□□ 0.51
CDX1-201ENST00000231656 FAM74A7A6NL05 159 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 COX7A1P24310 79 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 NPBWR1P48145 328 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 RAB13P51153 203 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 FAM74A3Q4VXF1 159 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 BEND2Q8NDZ0 799 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 SLC35B3Q9H1N7 401 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 UNKLQ9H9P5 680 aaKnown RBP18.22■□□□□ 0.51
CDX1-201ENST00000231656 PLEKHA3Q9HB20 300 aa18.22■□□□□ 0.51
CDX1-201ENST00000231656 PRRC2AP48634 2157 aaKnown RBP18.22■□□□□ 0.51
CDX1-201ENST00000231656 IGLV2-23P01705 113 aa18.21■□□□□ 0.51
CDX1-201ENST00000231656 MC5RP33032 325 aa18.21■□□□□ 0.51
CDX1-201ENST00000231656 VMO1Q7Z5L0 202 aa18.21■□□□□ 0.51
CDX1-201ENST00000231656 PNKDQ8N490 385 aa18.21■□□□□ 0.51
CDX1-201ENST00000231656 RPP25LQ8N5L8 163 aaKnown RBP18.21■□□□□ 0.51
CDX1-201ENST00000231656 OR5B3Q8NH48 314 aa18.21■□□□□ 0.51
CDX1-201ENST00000231656 OR4A5Q8NH83 315 aa18.21■□□□□ 0.51
CDX1-201ENST00000231656 TMEM167AQ8TBQ9 72 aa18.21■□□□□ 0.51
CDX1-201ENST00000231656 HINT2Q9BX68 163 aa18.21■□□□□ 0.51
CDX1-201ENST00000231656 INSIG2Q9Y5U4 225 aa18.21■□□□□ 0.51
CDX1-201ENST00000231656 CA2P00918 260 aa18.2■□□□□ 0.5
CDX1-201ENST00000231656 IFNA4P05014 189 aa18.2■□□□□ 0.5
CDX1-201ENST00000231656 ICAM4Q14773 271 aa18.2■□□□□ 0.5
CDX1-201ENST00000231656 HAGHQ16775 308 aa18.2■□□□□ 0.5
CDX1-201ENST00000231656 ZNF506Q5JVG8 444 aa18.2■□□□□ 0.5
CDX1-201ENST00000231656 LCN15Q6UWW0 184 aa18.2■□□□□ 0.5
CDX1-201ENST00000231656 ZNF709Q8N972 641 aa18.2■□□□□ 0.5
CDX1-201ENST00000231656 RNF223E7ERA6 249 aa18.19■□□□□ 0.5
CDX1-201ENST00000231656 C17orf112F2Z3M2 114 aa18.19■□□□□ 0.5
CDX1-201ENST00000231656 BUB1B-PAK6H3BSN5 160 aa18.19■□□□□ 0.5
CDX1-201ENST00000231656 MBP02144 154 aa18.19■□□□□ 0.5
CDX1-201ENST00000231656 OPN1MWP04001 364 aa18.19■□□□□ 0.5
CDX1-201ENST00000231656 OPN1MW2P0DN77 364 aa18.19■□□□□ 0.5
CDX1-201ENST00000231656 OPN1MW3P0DN78 364 aa18.19■□□□□ 0.5
CDX1-201ENST00000231656 LOXL1Q08397 574 aaPredicted RBP18.19■□□□□ 0.5
CDX1-201ENST00000231656 FFAR4Q5NUL3 377 aa18.19■□□□□ 0.5
CDX1-201ENST00000231656 C1orf159Q96HA4 380 aa18.19■□□□□ 0.5
CDX1-201ENST00000231656 Q96MF0 132 aa18.19■□□□□ 0.5
CDX1-201ENST00000231656 CR1P17927 2039 aa18.19■□□□□ 0.5
CDX1-201ENST00000231656 CREBBPQ92793 2442 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms