RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 STEAP1BQ6NZ63 245 aa10.59□□□□□ -0.71
VEGFA-201ENST00000230480 TBC1D26Q86UD7 250 aa10.59□□□□□ -0.71
VEGFA-201ENST00000230480 OR4C16Q8NGL9 310 aa10.59□□□□□ -0.71
VEGFA-201ENST00000230480 OR5M8Q8NGP6 311 aa10.59□□□□□ -0.71
VEGFA-201ENST00000230480 RBPMSQ93062 196 aaKnown RBP10.59□□□□□ -0.71
VEGFA-201ENST00000230480 RTBDNQ9BSG5 229 aaPredicted RBP10.59□□□□□ -0.71
VEGFA-201ENST00000230480 PLEKHA2Q9HB19 425 aa10.59□□□□□ -0.71
VEGFA-201ENST00000230480 VSIG4Q9Y279 399 aa10.59□□□□□ -0.71
VEGFA-201ENST00000230480 TRBV9A0A0B4J1U6 114 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 KRBOX1C9JBD0 128 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 PRAF2O60831 178 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 CNIH1O95406 144 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 TRBV12-3P01733 135 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 IGHV3-11P01762 117 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 PRH1P02810 166 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 OR9G9P0C7N8 305 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 P0C879 139 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 SULT1A3P0DMM9 295 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 SULT1A4P0DMN0 295 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 AREGP15514 252 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 KIR2DS2P43631 304 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 TAS2R31P59538 309 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 OR2B8PP59922 312 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 RND3P61587 244 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 TSPAN5P62079 268 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 MRPS10P82664 201 aaKnown RBP10.58□□□□□ -0.72
VEGFA-201ENST00000230480 TMEM267Q0VDI3 215 aaPredicted RBP10.58□□□□□ -0.72
VEGFA-201ENST00000230480 EXOSC2Q13868 293 aaKnown RBP10.58□□□□□ -0.72
VEGFA-201ENST00000230480 RNASE10Q5GAN6 216 aaKnown RBP10.58□□□□□ -0.72
VEGFA-201ENST00000230480 PXDC1Q5TGL8 231 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 MMD2Q8IY49 270 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 ARRDC1Q8N5I2 433 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 TTC9CQ8N5M4 171 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 UXS1Q8NBZ7 420 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 OR11H1Q8NG94 326 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 TERB2Q8NHR7 220 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 ABHD5Q8WTS1 349 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 FANCD2OSQ96PS1 177 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 ZC4H2Q9NQZ6 224 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 SLC2A9Q9NRM0 540 aa10.58□□□□□ -0.72
VEGFA-201ENST00000230480 IGHV4OR15-8A0A075B7B6 117 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 A0A087WW49 117 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 NUDT19A8MXV4 375 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 SMLR1H3BR10 107 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 TSC22D2O75157 780 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 RAB3DO95716 219 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 ATF4P18848 351 aaPredicted RBP10.57□□□□□ -0.72
VEGFA-201ENST00000230480 TBPP20226 339 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 TAS2R19P59542 299 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 KLF9Q13886 244 aaPredicted RBP10.57□□□□□ -0.72
VEGFA-201ENST00000230480 OR1N2Q8NGR9 330 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 MARCH1Q8TCQ1 289 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 C15orf40Q8WUR7 153 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 SEC22AQ96IW7 307 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 TP53RKQ96S44 253 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 TMEM140Q9NV12 185 aa10.57□□□□□ -0.72
VEGFA-201ENST00000230480 IGLC7A0M8Q6 106 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 MPPED1O15442 326 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 HRASP01112 189 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 IGKV1-5P01602 117 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 PF4P02776 101 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 CRYGCP07315 174 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 LGALS1P09382 135 aaKnown RBP10.56□□□□□ -0.72
VEGFA-201ENST00000230480 NQO2P16083 231 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 EGFEM1PQ0D2K5 195 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 CATR1Q13166 79 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 IZUMO4Q1ZYL8 232 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 OR11H7Q8NGC8 314 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 TMEM230Q96A57 120 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 TMEM68Q96MH6 324 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 C5orf66Q9H5L9 145 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 FAM212BQ9NTI7 297 aaPredicted RBP10.56□□□□□ -0.72
VEGFA-201ENST00000230480 COMMD9Q9P000 198 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 GPR132Q9UNW8 380 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 NSG2Q9Y328 171 aa10.56□□□□□ -0.72
VEGFA-201ENST00000230480 TEX50A0A1B0GTY4 177 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 H3BUA1 57 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 KRASP01116 189 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 TRGV3P03979 118 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 HLA-GP17693 338 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 CD33P20138 364 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 BTCP35070 178 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 G6PCP35575 357 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 NUP62P37198 522 aaPredicted RBP10.55□□□□□ -0.72
VEGFA-201ENST00000230480 RPL27AP46776 148 aaKnown RBP10.55□□□□□ -0.72
VEGFA-201ENST00000230480 SLURP1P55000 103 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 MFAP2P55001 183 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 TPPP2P59282 170 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 RPL8P62917 257 aaKnown RBP10.55□□□□□ -0.72
VEGFA-201ENST00000230480 OR10W1Q8NGF6 305 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 OR4A5Q8NH83 315 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 CD300LFQ8TDQ1 290 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 DCUN1D4Q92564 292 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 DLX4Q92988 240 aaPredicted RBP10.55□□□□□ -0.72
VEGFA-201ENST00000230480 ZNF414Q96IQ9 312 aa10.55□□□□□ -0.72
VEGFA-201ENST00000230480 THAP7Q9BT49 309 aaPredicted RBP10.55□□□□□ -0.72
VEGFA-201ENST00000230480 A0A0G2JRQ6 117 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 MARCH11A6NNE9 402 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 TCRBP04435 133 aa10.54□□□□□ -0.72
VEGFA-201ENST00000230480 CTSDP07339 412 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms