RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 ADH4P08319 380 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 RANP62826 216 aaKnown RBP10.19□□□□□ -0.78
NUP88-201ENST00000225696 Q0VG73 95 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 PSG5Q15238 335 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 MLANAQ16655 118 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 TMEM183BQ1AE95 376 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 MSMPQ1L6U9 139 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 SMIM21Q3B7S5 101 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 CNEP1R1Q8N9A8 125 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 OR52E5Q8NH55 327 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 TXNDC17Q9BRA2 123 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 SFXN3Q9BWM7 321 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 HINT2Q9BX68 163 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 OPN3Q9H1Y3 402 aaPredicted RBP10.19□□□□□ -0.78
NUP88-201ENST00000225696 NAT8BQ9UHF3 227 aa10.19□□□□□ -0.78
NUP88-201ENST00000225696 KLF13Q9Y2Y9 288 aaPredicted RBP10.19□□□□□ -0.78
NUP88-201ENST00000225696 TBL2Q9Y4P3 447 aaKnown RBP10.19□□□□□ -0.78
NUP88-201ENST00000225696 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.18□□□□□ -0.78
NUP88-201ENST00000225696 ZNF891A8MT65 544 aaPredicted RBP10.18□□□□□ -0.78
NUP88-201ENST00000225696 CECR9P0C854 216 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 RHOBP62745 196 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 RPP30P78346 268 aaKnown RBP10.18□□□□□ -0.78
NUP88-201ENST00000225696 PRR20EP86478 221 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 PRR20CP86479 221 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 PRR20DP86480 221 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 PRR20BP86481 221 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 PRR20AP86496 221 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 FAM201AQ5SY85 155 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 VWA1Q6PCB0 445 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 FAM214BQ7L5A3 538 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 DDB2Q92466 427 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 GMPPAQ96IJ6 420 aaPredicted RBP10.18□□□□□ -0.78
NUP88-201ENST00000225696 UHRF2Q96PU4 802 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 S1PR3Q99500 378 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 INTS1Q8N201 2190 aaKnown RBP10.18□□□□□ -0.78
NUP88-201ENST00000225696 KALRNO60229 2985 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 DMXL1Q9Y485 3027 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 A0A1W2PS18 150 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 C9JCJ5 164 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 M0QZK8 103 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 M0R296 226 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 IGKV3-15P01624 115 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 OR10J4P0C629 311 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 NPY1RP25929 384 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 ZNF83P51522 516 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 ERVK-16P61578 105 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 MMDQ15546 238 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 PRR31Q5SQ13 230 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 OR4A47Q6IF82 309 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 MRPL54Q6P161 138 aaKnown RBP10.18□□□□□ -0.78
NUP88-201ENST00000225696 DUX4L9Q6RFH8 374 aaPredicted RBP10.18□□□□□ -0.78
NUP88-201ENST00000225696 TMEM136Q6ZRR5 245 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 C1orf210Q8IVY1 113 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 FAM19A2Q8N3H0 131 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 NHLRC2Q8NBF2 726 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 SLC24A4Q8NFF2 622 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 NRN1Q9NPD7 142 aa10.18□□□□□ -0.78
NUP88-201ENST00000225696 DSCAMO60469 2012 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 HELTA6NFD8 242 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 FAM90A9PA6NNJ1 464 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 C15orf61A6NNL5 157 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 GGTLC3B5MD39 225 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 DIRC3C9JPN6 131 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 IGLV2-8P01709 118 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 PMCHP20382 165 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 GNG4P50150 75 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 MAJINQ3KP22 176 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 INO80CQ6PI98 192 aaPredicted RBP10.17□□□□□ -0.78
NUP88-201ENST00000225696 SIGLECL1Q8N7X8 197 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 OR2Z1Q8NG97 314 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 FAM168AQ92567 244 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 LINC00479Q96M42 142 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 ZPBPQ9BS86 351 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 ZNRD1Q9P1U0 126 aa10.17□□□□□ -0.78
NUP88-201ENST00000225696 RP1L1Q8IWN7 2480 aaPredicted RBP10.17□□□□□ -0.78
NUP88-201ENST00000225696 A8MXE2 369 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 CTRLP40313 264 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 CX3CL1P78423 397 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 CT45A1Q5HYN5 189 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 ALKBH2Q6NS38 261 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 Q6ZT83 130 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 CT45A3Q8NHU0 189 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 TRIB1Q96RU8 372 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 GNB1LQ9BYB4 327 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 WNT10AQ9GZT5 417 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 CHODLQ9H9P2 273 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 TRAV9-1A0A075B6T8 112 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 SAA2-SAA4A0A096LPE2 208 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 BMPR1BO00238 502 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 SAA2P0DJI9 122 aaPredicted RBP10.16□□□□□ -0.78
NUP88-201ENST00000225696 AMTP48728 403 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 MRPS11P82912 194 aaKnown RBP10.16□□□□□ -0.78
NUP88-201ENST00000225696 MORN5Q5VZ52 161 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 DMRTA1Q5VZB9 504 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 ATOH7Q8N100 152 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 RBM14Q96PK6 669 aaKnown RBP10.16□□□□□ -0.78
NUP88-201ENST00000225696 TMEM14BQ9NUH8 114 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 JPT1Q9UK76 154 aa10.16□□□□□ -0.78
NUP88-201ENST00000225696 TRGV8A0A0C4DH27 118 aa10.15□□□□□ -0.78
NUP88-201ENST00000225696 AREGP15514 252 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms