RNA–Protein interactions for RNA: ENST00000222812.7

STX1A-201, Transcript of syntaxin 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene STX1A, Length 2,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-201ENST00000222812 TUBA4BQ9H853 241 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 OTOGQ6ZRI0 2925 aa12.06□□□□□ -0.48
STX1A-201ENST00000222812 PITX3O75364 302 aa12.05□□□□□ -0.48
STX1A-201ENST00000222812 GATA3P23771 443 aa12.05□□□□□ -0.48
STX1A-201ENST00000222812 CNTFRP26992 372 aa12.05□□□□□ -0.48
STX1A-201ENST00000222812 RNF212Q495C1 297 aa12.05□□□□□ -0.48
STX1A-201ENST00000222812 TMEM177Q53S58 311 aa12.05□□□□□ -0.48
STX1A-201ENST00000222812 MINOS1Q5TGZ0 78 aa12.05□□□□□ -0.48
STX1A-201ENST00000222812 H2BFWTQ7Z2G1 175 aa12.05□□□□□ -0.48
STX1A-201ENST00000222812 PDPNQ86YL7 162 aa12.05□□□□□ -0.48
STX1A-201ENST00000222812 RHOVQ96L33 236 aa12.05□□□□□ -0.48
STX1A-201ENST00000222812 HARBI1Q96MB7 349 aa12.05□□□□□ -0.48
STX1A-201ENST00000222812 SLC25A31Q9H0C2 315 aa12.05□□□□□ -0.48
STX1A-201ENST00000222812 TMEM140Q9NV12 185 aa12.05□□□□□ -0.48
STX1A-201ENST00000222812 TBL2Q9Y4P3 447 aaKnown RBP12.05□□□□□ -0.48
STX1A-201ENST00000222812 MINOS1-NBL1R4GNA1 71 aa12.05□□□□□ -0.48
STX1A-201ENST00000222812 TXNL1O43396 289 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 PRH1P02810 166 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 IFNA4P05014 189 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 MC5RP33032 325 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 RPS16P62249 146 aaKnown RBP12.04□□□□□ -0.48
STX1A-201ENST00000222812 CYB5R2Q6BCY4 276 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 OR4A47Q6IF82 309 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 EIF5A2Q9GZV4 153 aaKnown RBP12.04□□□□□ -0.48
STX1A-201ENST00000222812 MAGT1Q9H0U3 335 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 SH3BGRL3Q9H299 93 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 MXRA5Q9NR99 2828 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 PIGBOS1A0A0B4J2F0 54 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 A0A1B0GU03 582 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 ZNF98A6NK75 572 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 UMAD1C9J7I0 102 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 OR2B8PP59922 312 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 HNF4GQ14541 408 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 HSD17B11Q8NBQ5 300 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 MALSU1Q96EH3 234 aa12.04□□□□□ -0.48
STX1A-201ENST00000222812 LYRM2Q9NU23 88 aaPredicted RBP12.04□□□□□ -0.48
STX1A-201ENST00000222812 IGLV2-23P01705 113 aa12.03□□□□□ -0.48
STX1A-201ENST00000222812 SAA1P0DJI8 122 aaPredicted RBP12.03□□□□□ -0.48
STX1A-201ENST00000222812 MYOD1P15172 320 aa12.03□□□□□ -0.48
STX1A-201ENST00000222812 FHITP49789 147 aa12.03□□□□□ -0.48
STX1A-201ENST00000222812 RAB5BP61020 215 aa12.03□□□□□ -0.48
STX1A-201ENST00000222812 ERVK-16P61578 105 aa12.03□□□□□ -0.48
STX1A-201ENST00000222812 FAM120AOSQ5T036 256 aa12.03□□□□□ -0.48
STX1A-201ENST00000222812 OR4C13Q8NGP0 309 aa12.03□□□□□ -0.48
STX1A-201ENST00000222812 OSR1Q8TAX0 266 aaPredicted RBP12.03□□□□□ -0.48
STX1A-201ENST00000222812 SLC35B3Q9H1N7 401 aa12.03□□□□□ -0.48
STX1A-201ENST00000222812 RPS10P5Q9NQ39 176 aa12.03□□□□□ -0.48
STX1A-201ENST00000222812 SONP18583 2426 aaKnown RBP12.03□□□□□ -0.48
STX1A-201ENST00000222812 A0A0U1RQK1 487 aa12.02□□□□□ -0.48
STX1A-201ENST00000222812 FAM24AA6NFZ4 105 aa12.02□□□□□ -0.48
STX1A-201ENST00000222812 VENTXO95231 258 aa12.02□□□□□ -0.48
STX1A-201ENST00000222812 HRASP01112 189 aa12.02□□□□□ -0.48
STX1A-201ENST00000222812 IGKV1D-33P01593 117 aa12.02□□□□□ -0.48
STX1A-201ENST00000222812 IGKV1-33P01594 117 aa12.02□□□□□ -0.48
STX1A-201ENST00000222812 MT-ND4LP03901 98 aa12.02□□□□□ -0.48
STX1A-201ENST00000222812 AKR1D1P51857 326 aa12.02□□□□□ -0.48
STX1A-201ENST00000222812 POLR2GP62487 172 aaKnown RBP eCLIP12.02□□□□□ -0.48
STX1A-201ENST00000222812 HABP2Q14520 560 aaPredicted RBP12.02□□□□□ -0.48
STX1A-201ENST00000222812 AWAT1Q58HT5 328 aa12.02□□□□□ -0.48
STX1A-201ENST00000222812 CLCC1Q96S66 551 aa12.02□□□□□ -0.48
STX1A-201ENST00000222812 QTRT1Q9BXR0 403 aaKnown RBP12.02□□□□□ -0.48
STX1A-201ENST00000222812 COA4Q9NYJ1 87 aa12.02□□□□□ -0.48
STX1A-201ENST00000222812 IGSF23A1L1A6 192 aa12.02□□□□□ -0.49
STX1A-201ENST00000222812 C7orf77A4D0Y5 90 aa12.02□□□□□ -0.49
STX1A-201ENST00000222812 SNRNP70P08621 437 aaKnown RBP12.02□□□□□ -0.49
STX1A-201ENST00000222812 SLC25A6P12236 298 aa12.02□□□□□ -0.49
STX1A-201ENST00000222812 RPL35P42766 123 aaKnown RBP12.02□□□□□ -0.49
STX1A-201ENST00000222812 RELBQ01201 579 aa12.02□□□□□ -0.49
STX1A-201ENST00000222812 ID3Q02535 119 aa12.02□□□□□ -0.49
STX1A-201ENST00000222812 BAXQ07812 192 aa12.02□□□□□ -0.49
STX1A-201ENST00000222812 SPINK9Q5DT21 86 aa12.02□□□□□ -0.49
STX1A-201ENST00000222812 TMEM252Q8N6L7 170 aa12.02□□□□□ -0.49
STX1A-201ENST00000222812 HIST1H2BAQ96A08 127 aa12.02□□□□□ -0.49
STX1A-201ENST00000222812 TPSG1Q9NRR2 321 aa12.02□□□□□ -0.49
STX1A-201ENST00000222812 BTBD17A6NE02 478 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 J3QLI3 93 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 RBMXL2O75526 392 aaKnown RBP12.01□□□□□ -0.49
STX1A-201ENST00000222812 VAMP2P63027 116 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 RHEBQ15382 184 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 POU2AF1Q16633 256 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 TMEM182Q6ZP80 229 aaPredicted RBP12.01□□□□□ -0.49
STX1A-201ENST00000222812 C22orf15Q8WYQ4 148 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 C1orf196B1AJZ1 125 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 SLC25A17O43808 307 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 IL6RP08887 468 aaPredicted RBP12.01□□□□□ -0.49
STX1A-201ENST00000222812 ATP6V0CP27449 155 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 CD1BP29016 333 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 KRTAP1-1Q07627 177 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 BCL6BQ8N143 479 aaPredicted RBP12.01□□□□□ -0.49
STX1A-201ENST00000222812 OR2G3Q8NGZ4 309 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 FAM213BQ8TBF2 198 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 SFT2D1Q8WV19 159 aa12.01□□□□□ -0.49
STX1A-201ENST00000222812 GNPNAT1Q96EK6 184 aaPredicted RBP12.01□□□□□ -0.49
STX1A-201ENST00000222812 EAF1Q96JC9 268 aaPredicted RBP12.01□□□□□ -0.49
STX1A-201ENST00000222812 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.01□□□□□ -0.49
STX1A-201ENST00000222812 SETXQ7Z333 2677 aaKnown RBP12□□□□□ -0.49
STX1A-201ENST00000222812 OOSP1A8MZH6 123 aa12□□□□□ -0.49
STX1A-201ENST00000222812 SSSCA1O60232 199 aa12□□□□□ -0.49
STX1A-201ENST00000222812 HES1Q14469 280 aa12□□□□□ -0.49
STX1A-201ENST00000222812 CCDC144NLQ6NUI1 221 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms