RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 TMEM11P17152 192 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 BPIFB3P59826 476 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 CT45A1Q5HYN5 189 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 CT45A3Q8NHU0 189 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 SLC17A3O00476 420 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 SLC25A5P05141 298 aaKnown RBP11.29□□□□□ -0.6
RAB3D-201ENST00000222120 CYP2G1PQ6ZSU1 146 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 ZNF439Q8NDP4 499 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 RALYQ9UKM9 306 aaKnown RBP11.29□□□□□ -0.6
RAB3D-201ENST00000222120 TRBV6-6A0A0A6YYG2 114 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 SCO2A0A1W2PP80 73 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 SNURFLB1AK76 121 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 TAS2R60P59551 318 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 ZNF124Q15973 351 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 KIAA1644Q3SXP7 199 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 BORCS7Q96B45 105 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 NOL4LQ96MY1 436 aaPredicted RBP11.29□□□□□ -0.6
RAB3D-201ENST00000222120 ZNF586Q9NXT0 402 aa11.29□□□□□ -0.6
RAB3D-201ENST00000222120 TMEM250H0YL14 139 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 CGAP01215 116 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 CRISP2P16562 243 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 PAX5Q02548 391 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 Q6ZSR3 168 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 MBNL3Q9NUK0 354 aaKnown RBP11.28□□□□□ -0.6
RAB3D-201ENST00000222120 IGKV1D-17A0A075B6S4 117 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 SRRM5B3KS81 715 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 SOD3P08294 240 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 IL6RP08887 468 aaPredicted RBP11.28□□□□□ -0.6
RAB3D-201ENST00000222120 C1QTNF9P0C862 333 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 TPPP2P59282 170 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 C10orf91Q5T1B1 145 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 SNRNP40Q96DI7 357 aaKnown RBP11.28□□□□□ -0.6
RAB3D-201ENST00000222120 TBX15Q96SF7 602 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 DERL1Q9BUN8 251 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 PLSCR4Q9NRQ2 329 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 INSIG2Q9Y5U4 225 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 MPDU1O75352 247 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 CD3EP07766 207 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 LINC00869P0C866 280 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 RPL8P62917 257 aaKnown RBP11.28□□□□□ -0.6
RAB3D-201ENST00000222120 TMEM14EPQ6UXP3 125 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 PQLC2Q6ZP29 291 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 DCAF16Q9NXF7 216 aa11.28□□□□□ -0.6
RAB3D-201ENST00000222120 IGKV3-15P01624 115 aa11.27□□□□□ -0.6
RAB3D-201ENST00000222120 OR5I1Q13606 314 aa11.27□□□□□ -0.6
RAB3D-201ENST00000222120 FAM90A1Q86YD7 464 aa11.27□□□□□ -0.6
RAB3D-201ENST00000222120 NABP2Q9BQ15 211 aa11.27□□□□□ -0.6
RAB3D-201ENST00000222120 NCBP2LA6PVI3 153 aaKnown RBP11.27□□□□□ -0.61
RAB3D-201ENST00000222120 IGHV2-70P01814 119 aa11.27□□□□□ -0.61
RAB3D-201ENST00000222120 LYZP61626 148 aa11.27□□□□□ -0.61
RAB3D-201ENST00000222120 BSPH1Q075Z2 132 aa11.27□□□□□ -0.61
RAB3D-201ENST00000222120 DUX4L9Q6RFH8 374 aaPredicted RBP11.27□□□□□ -0.61
RAB3D-201ENST00000222120 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.61
RAB3D-201ENST00000222120 HAPLN4Q86UW8 402 aa11.27□□□□□ -0.61
RAB3D-201ENST00000222120 MBD3L1Q8WWY6 194 aa11.27□□□□□ -0.61
RAB3D-201ENST00000222120 DOLPP1Q86YN1 238 aa11.27□□□□□ -0.61
RAB3D-201ENST00000222120 OR8I2Q8N0Y5 310 aa11.27□□□□□ -0.61
RAB3D-201ENST00000222120 KDF1Q8NAX2 398 aaPredicted RBP11.27□□□□□ -0.61
RAB3D-201ENST00000222120 AP1S3Q96PC3 154 aa11.27□□□□□ -0.61
RAB3D-201ENST00000222120 TMEM167BQ9NRX6 74 aa11.27□□□□□ -0.61
RAB3D-201ENST00000222120 CEACAM1P13688 526 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 CCKARP32238 428 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 OR1L6Q8NGR2 347 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 IMMP2LQ96T52 175 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 SLC25A15Q9Y619 301 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 CACNA1AO00555 2505 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 PRB4P10163 310 aaPredicted RBP11.26□□□□□ -0.61
RAB3D-201ENST00000222120 GCHFRP30047 84 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 ERVK11-1P61568 191 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 RPEL1Q2QD12 228 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 PLA2G2CQ5R387 149 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 SSX7Q7RTT5 188 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 C1orf174Q8IYL3 243 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 NPIPB3Q92617 1050 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 TIMM9Q9Y5J7 89 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 LYNX1G3V0Z9 82 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 IGKV1D-33P01593 117 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 IGKV1-33P01594 117 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 LYNX1P0DP58 116 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 ZNF726P1Q15940 193 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 FAM90A2PQ658T7 463 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 Q8NFD4 153 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 OR5AU1Q8NGC0 362 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 LINC01560Q8TB33 94 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 TIMD4Q96H15 378 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 A0A087WWC5 75 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 CBLN1P23435 193 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 RND2P52198 227 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 KRTAP27-1Q3LI81 207 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 KRTCAP3Q53RY4 240 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 VSTM2AQ8TAG5 236 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 VN1R17PQ8TDU5 208 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 C14orf144Q96I85 54 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 GOLT1BQ9Y3E0 138 aa11.26□□□□□ -0.61
RAB3D-201ENST00000222120 FAM87AP0C7U9 286 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 AMTP48728 403 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 MIR17HGQ75NE6 70 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 LHFPL4Q7Z7J7 247 aa11.25□□□□□ -0.61
RAB3D-201ENST00000222120 TMEM183AQ8IXX5 376 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms