RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 MAPK1IP1LQ8NDC0 245 aa17.86■□□□□ 0.45
HOXC8-201ENST00000040584 TCTEX1D2Q8WW35 142 aa17.86■□□□□ 0.45
HOXC8-201ENST00000040584 WDR61Q9GZS3 305 aaKnown RBP17.86■□□□□ 0.45
HOXC8-201ENST00000040584 SIRPDQ9H106 197 aa17.86■□□□□ 0.45
HOXC8-201ENST00000040584 PDZD2O15018 2839 aa17.86■□□□□ 0.45
HOXC8-201ENST00000040584 IFNA1P01562 189 aa17.86■□□□□ 0.45
HOXC8-201ENST00000040584 PNRC1Q12796 327 aaPredicted RBP17.86■□□□□ 0.45
HOXC8-201ENST00000040584 KLRD1Q13241 179 aa17.86■□□□□ 0.45
HOXC8-201ENST00000040584 TMEM41BQ5BJD5 291 aa17.86■□□□□ 0.45
HOXC8-201ENST00000040584 PRSS57Q6UWY2 283 aa17.86■□□□□ 0.45
HOXC8-201ENST00000040584 TMEM14EPQ6UXP3 125 aa17.86■□□□□ 0.45
HOXC8-201ENST00000040584 CENPVQ7Z7K6 275 aaPredicted RBP17.86■□□□□ 0.45
HOXC8-201ENST00000040584 Q96MF0 132 aa17.86■□□□□ 0.45
HOXC8-201ENST00000040584 CIB3Q96Q77 187 aaPredicted RBP17.86■□□□□ 0.45
HOXC8-201ENST00000040584 PCGF1Q9BSM1 259 aa17.86■□□□□ 0.45
HOXC8-201ENST00000040584 RPRMQ9NS64 109 aa17.86■□□□□ 0.45
HOXC8-201ENST00000040584 ARG1P05089 322 aa17.85■□□□□ 0.45
HOXC8-201ENST00000040584 PRRX1P54821 245 aa17.85■□□□□ 0.45
HOXC8-201ENST00000040584 IZUMO4Q1ZYL8 232 aa17.85■□□□□ 0.45
HOXC8-201ENST00000040584 SPANXN5Q5MJ07 72 aa17.85■□□□□ 0.45
HOXC8-201ENST00000040584 NCR3LG1Q68D85 454 aa17.85■□□□□ 0.45
HOXC8-201ENST00000040584 OR13D1Q8NGV5 346 aa17.85■□□□□ 0.45
HOXC8-201ENST00000040584 TNFRSF14Q92956 283 aa17.85■□□□□ 0.45
HOXC8-201ENST00000040584 YPEL4Q96NS1 127 aa17.85■□□□□ 0.45
HOXC8-201ENST00000040584 INSIG2Q9Y5U4 225 aa17.85■□□□□ 0.45
HOXC8-201ENST00000040584 RAMP3O60896 148 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 NDUFS6O75380 124 aaKnown RBP17.84■□□□□ 0.45
HOXC8-201ENST00000040584 IGLV1-47P01700 117 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 S100A9P06702 114 aaKnown RBP17.84■□□□□ 0.45
HOXC8-201ENST00000040584 P0C879 139 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 HCP5Q6MZN7 132 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 ZNF833PQ6ZTB9 187 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 CYB561D1Q8N8Q1 229 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 S1PR3Q99500 378 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 TOX4O94842 621 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 MBP02144 154 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 DLK1P80370 383 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 DIAPH2-AS1Q14236 149 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 HLA-DRB5Q30154 266 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 TAF15Q92804 592 aaKnown RBP eCLIP17.84■□□□□ 0.45
HOXC8-201ENST00000040584 RSG1Q9BU20 258 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 RBKSQ9H477 322 aa17.84■□□□□ 0.45
HOXC8-201ENST00000040584 MSMBP08118 114 aa17.83■□□□□ 0.44
HOXC8-201ENST00000040584 BCL2P10415 239 aa17.83■□□□□ 0.44
HOXC8-201ENST00000040584 REG1BP48304 166 aa17.83■□□□□ 0.44
HOXC8-201ENST00000040584 ZNF137PP52743 207 aa17.83■□□□□ 0.44
HOXC8-201ENST00000040584 SLC38A11Q08AI6 406 aa17.83■□□□□ 0.44
HOXC8-201ENST00000040584 ARL16Q0P5N6 197 aa17.83■□□□□ 0.44
HOXC8-201ENST00000040584 RBMS3Q6XE24 437 aaKnown RBP17.83■□□□□ 0.44
HOXC8-201ENST00000040584 BEND2Q8NDZ0 799 aa17.83■□□□□ 0.44
HOXC8-201ENST00000040584 DDB2Q92466 427 aa17.83■□□□□ 0.44
HOXC8-201ENST00000040584 OR4C12Q96R67 309 aa17.83■□□□□ 0.44
HOXC8-201ENST00000040584 TMEM242Q9NWH2 141 aa17.83■□□□□ 0.44
HOXC8-201ENST00000040584 B4DSR2 109 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 SMIM6P0DI80 62 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 LOXL1Q08397 574 aaPredicted RBP17.82■□□□□ 0.44
HOXC8-201ENST00000040584 HAPLN4Q86UW8 402 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 OR11H6Q8NGC7 330 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 ST6GALNAC6Q969X2 333 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 TBX15Q96SF7 602 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 GNG13Q9P2W3 67 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 SVEP1Q4LDE5 3571 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 PRRC2AP48634 2157 aaKnown RBP17.82■□□□□ 0.44
HOXC8-201ENST00000040584 CT45A6P0DMU7 189 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 CT45A5P0DMU8 189 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 CT45A7P0DMV0 189 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 PAX8Q06710 450 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 OR4P4Q8NGL7 312 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 TMEM186Q96B77 213 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 VAX2Q9UIW0 290 aa17.82■□□□□ 0.44
HOXC8-201ENST00000040584 A0A1W2PRD5 423 aa17.81■□□□□ 0.44
HOXC8-201ENST00000040584 A0A1W2PRF3 423 aa17.81■□□□□ 0.44
HOXC8-201ENST00000040584 A0A1W2PRM7 423 aa17.81■□□□□ 0.44
HOXC8-201ENST00000040584 BUB1B-PAK6H3BSN5 160 aa17.81■□□□□ 0.44
HOXC8-201ENST00000040584 EIF3GO75821 320 aaKnown RBP eCLIP17.81■□□□□ 0.44
HOXC8-201ENST00000040584 HOXB4P17483 251 aaPredicted RBP17.81■□□□□ 0.44
HOXC8-201ENST00000040584 THBS3P49746 956 aa17.81■□□□□ 0.44
HOXC8-201ENST00000040584 ZNF816Q0VGE8 651 aaPredicted RBP17.81■□□□□ 0.44
HOXC8-201ENST00000040584 FAM71F2Q6NXP2 309 aa17.81■□□□□ 0.44
HOXC8-201ENST00000040584 ZNF383Q8NA42 475 aa17.81■□□□□ 0.44
HOXC8-201ENST00000040584 C1orf159Q96HA4 380 aa17.81■□□□□ 0.44
HOXC8-201ENST00000040584 ADTRPQ96IZ2 230 aa17.81■□□□□ 0.44
HOXC8-201ENST00000040584 MRPL20Q9BYC9 149 aaKnown RBP17.81■□□□□ 0.44
HOXC8-201ENST00000040584 AP4M1O00189 453 aa17.8■□□□□ 0.44
HOXC8-201ENST00000040584 RBFOX2O43251 390 aaKnown RBP eCLIP17.8■□□□□ 0.44
HOXC8-201ENST00000040584 FCGR3BO75015 233 aa17.8■□□□□ 0.44
HOXC8-201ENST00000040584 IL3RAP26951 378 aa17.8■□□□□ 0.44
HOXC8-201ENST00000040584 CEBPGP53567 150 aa17.8■□□□□ 0.44
HOXC8-201ENST00000040584 WFDC11Q8NEX6 87 aa17.8■□□□□ 0.44
HOXC8-201ENST00000040584 TMEM147Q9BVK8 224 aa17.8■□□□□ 0.44
HOXC8-201ENST00000040584 CCDC168Q8NDH2 2452 aa17.8■□□□□ 0.44
HOXC8-201ENST00000040584 TGOLN2O43493 480 aa17.8■□□□□ 0.44
HOXC8-201ENST00000040584 KRASP01116 189 aa17.8■□□□□ 0.44
HOXC8-201ENST00000040584 H2BFWTQ7Z2G1 175 aa17.8■□□□□ 0.44
HOXC8-201ENST00000040584 LHX4Q969G2 390 aa17.8■□□□□ 0.44
HOXC8-201ENST00000040584 RCC1LQ96I51 464 aaKnown RBP17.8■□□□□ 0.44
HOXC8-201ENST00000040584 SLC39A9Q9NUM3 307 aa17.8■□□□□ 0.44
HOXC8-201ENST00000040584 PCP4L1A6NKN8 68 aa17.79■□□□□ 0.44
HOXC8-201ENST00000040584 FAM90A9PA6NNJ1 464 aa17.79■□□□□ 0.44
HOXC8-201ENST00000040584 SOX15O60248 233 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms