RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SIGLECL1Q8N7X8 197 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 MS4A10Q96PG2 267 aa10.05□□□□□ -0.8
CHPF2-201ENST00000035307 MBD3L4A6NDZ8 208 aaPredicted RBP10.04□□□□□ -0.8
CHPF2-201ENST00000035307 MBD3L3A6NE82 208 aaPredicted RBP10.04□□□□□ -0.8
CHPF2-201ENST00000035307 MBD3L5A6NJ08 208 aaPredicted RBP10.04□□□□□ -0.8
CHPF2-201ENST00000035307 CHEK1O14757 476 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 FGF16O43320 207 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 Q56UQ5 140 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 MBD3L2Q8NHZ7 208 aaPredicted RBP10.04□□□□□ -0.8
CHPF2-201ENST00000035307 SLC45A2Q9UMX9 530 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 HSBP1O75506 76 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 CLEC3BP05452 202 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 SRP19P09132 144 aaKnown RBP10.04□□□□□ -0.8
CHPF2-201ENST00000035307 ZNF324BQ6AW86 544 aaPredicted RBP10.04□□□□□ -0.8
CHPF2-201ENST00000035307 DHRS7BQ6IAN0 325 aaPredicted RBP10.04□□□□□ -0.8
CHPF2-201ENST00000035307 ZNF525Q8N782 197 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 ZNF714Q96N38 554 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 MOSP00540 346 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 IGKV1-5P01602 117 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 AMTP48728 403 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 PNRC1Q12796 327 aaPredicted RBP10.04□□□□□ -0.8
CHPF2-201ENST00000035307 ZBTB34Q8NCN2 500 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 OR4D5Q8NGN0 318 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 BARX1Q9HBU1 254 aaPredicted RBP10.04□□□□□ -0.8
CHPF2-201ENST00000035307 NPVFQ9HCQ7 196 aa10.04□□□□□ -0.8
CHPF2-201ENST00000035307 SNURFLB1AK76 121 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 TMEM50AO95807 157 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 LINC00869P0C866 280 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 PAX5Q02548 391 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 Q6ZR03 302 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 FAM222BQ8WU58 562 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 SSBP3Q9BWW4 388 aaPredicted RBP10.03□□□□□ -0.8
CHPF2-201ENST00000035307 RAB1BQ9H0U4 201 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 GP6Q9HCN6 339 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 TMEM56-RWDD3S4R434 201 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 HELTA6NFD8 242 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 NAPSAO96009 420 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 TRGC1P0CF51 173 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 CRYBB3P26998 211 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 RND2P52198 227 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 SPCS3P61009 180 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 ID3Q02535 119 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 RNASEKQ6P5S7 137 aaKnown RBP10.03□□□□□ -0.8
CHPF2-201ENST00000035307 CARHSP1Q9Y2V2 147 aaKnown RBP10.03□□□□□ -0.8
CHPF2-201ENST00000035307 SLC17A3O00476 420 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 CA2P00918 260 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 TMEM42Q69YG0 159 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 IGFBPL1Q8WX77 278 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 PLSCR2Q9NRY7 297 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 TIMM9Q9Y5J7 89 aa10.03□□□□□ -0.8
CHPF2-201ENST00000035307 IGHV1-46P01743 117 aa10.02□□□□□ -0.8
CHPF2-201ENST00000035307 TIMP3P35625 211 aa10.02□□□□□ -0.8
CHPF2-201ENST00000035307 WDR86Q86TI4 376 aa10.02□□□□□ -0.8
CHPF2-201ENST00000035307 Q8NA96 180 aa10.02□□□□□ -0.8
CHPF2-201ENST00000035307 CLEC5AQ9NY25 188 aa10.02□□□□□ -0.8
CHPF2-201ENST00000035307 KHDC1LQ5JSQ8 128 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 C10orf55Q5SWW7 151 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 ZNF497Q6ZNH5 498 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 OR1L8Q8NGR8 309 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 Q8WTZ3 238 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 NPCDR1Q9BY65 106 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 IGHV3OR16-13A0A075B7E8 117 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 IGHV3-74A0A0B4J1X5 117 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 TRAV3A0A0B4J244 114 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 SEC14L6B5MCN3 397 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 ZNF253O75346 499 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 CT45A10P0DMU9 189 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 CRISP2P16562 243 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 IGFBP2P18065 325 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 MPZP25189 248 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 OR5I1Q13606 314 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 SLC35E4Q6ICL7 350 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 KDF1Q8NAX2 398 aaPredicted RBP10.02□□□□□ -0.81
CHPF2-201ENST00000035307 OR2D3Q8NGH3 330 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 NPIPB3Q92617 1050 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 LURAP1Q96LR2 239 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 TMUB1Q9BVT8 246 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 FGF23Q9GZV9 251 aaPredicted RBP10.02□□□□□ -0.81
CHPF2-201ENST00000035307 MANBALQ9NQG1 85 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 TECRQ9NZ01 308 aaKnown RBP10.02□□□□□ -0.81
CHPF2-201ENST00000035307 PRNDQ9UKY0 176 aa10.02□□□□□ -0.81
CHPF2-201ENST00000035307 IGHV1-69-2A0A0G2JMI3 117 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 NDUFS7O75251 213 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 SCGB2A1O75556 95 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 OR9G9P0C7N8 305 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 ARL16Q0P5N6 197 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 PQLC2Q6ZP29 291 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 OR8I2Q8N0Y5 310 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 OR5AU1Q8NGC0 362 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 LSM10Q969L4 123 aaKnown RBP10.01□□□□□ -0.81
CHPF2-201ENST00000035307 PERPQ96FX8 193 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 ADTRPQ96IZ2 230 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 KLF2Q9Y5W3 355 aaPredicted RBP10.01□□□□□ -0.81
CHPF2-201ENST00000035307 CEACAM18A8MTB9 384 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 IQCF6A8MYZ5 107 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 SSX7Q7RTT5 188 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 VKORC1Q9BQB6 163 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 ELOVL1Q9BW60 279 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 PAM16Q9Y3D7 125 aa10.01□□□□□ -0.81
CHPF2-201ENST00000035307 LOC102723971A0A1B0GUV8 181 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms