RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 A0A1B0GV50 99 aa11.54□□□□□ -0.56
RTFDC1-201ENST00000023939 ODF3BA8MYP8 253 aa11.54□□□□□ -0.56
RTFDC1-201ENST00000023939 ENSAO43768 121 aaKnown RBP11.54□□□□□ -0.56
RTFDC1-201ENST00000023939 RNASE2P10153 161 aaKnown RBP11.54□□□□□ -0.56
RTFDC1-201ENST00000023939 DLX1P56177 255 aa11.54□□□□□ -0.56
RTFDC1-201ENST00000023939 ARF6P62330 175 aa11.54□□□□□ -0.56
RTFDC1-201ENST00000023939 MRGPRG-AS1Q2M3A8 158 aa11.54□□□□□ -0.56
RTFDC1-201ENST00000023939 ARSJQ5FYB0 599 aaPredicted RBP11.54□□□□□ -0.56
RTFDC1-201ENST00000023939 TPTE2P1Q5T6R2 138 aa11.54□□□□□ -0.56
RTFDC1-201ENST00000023939 HCP5Q6MZN7 132 aa11.54□□□□□ -0.56
RTFDC1-201ENST00000023939 OR10G4Q8NGN3 311 aa11.54□□□□□ -0.56
RTFDC1-201ENST00000023939 ACTR3CQ9C0K3 210 aaPredicted RBP11.54□□□□□ -0.56
RTFDC1-201ENST00000023939 LOC102723971A0A1B0GUV8 181 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 A0A1W2PPI3 338 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 MAP1LC3B2A6NCE7 125 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 SEC14L6B5MCN3 397 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 DNASE2O00115 360 aaPredicted RBP11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 HTR1DP28221 377 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 MAS1LP35410 378 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 ERHP84090 104 aaKnown RBP11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 PAX2Q02962 417 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 ICAM4Q14773 271 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 TMEM249Q2WGJ8 235 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 ACOT6Q3I5F7 207 aaPredicted RBP11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 LCN15Q6UWW0 184 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 SSX7Q7RTT5 188 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 OR10G9Q8NGN4 311 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 OR10G7Q8NGN6 311 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 C1orf159Q96HA4 380 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 RITA1Q96K30 269 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 RARRES2Q99969 163 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 MAP1LC3BQ9GZQ8 125 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 SLC39A9Q9NUM3 307 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 DPM3Q9P2X0 92 aa11.53□□□□□ -0.56
RTFDC1-201ENST00000023939 CGB1A6NKQ9 187 aa11.52□□□□□ -0.56
RTFDC1-201ENST00000023939 CYB5BO43169 146 aa11.52□□□□□ -0.56
RTFDC1-201ENST00000023939 SLC25A17O43808 307 aa11.52□□□□□ -0.56
RTFDC1-201ENST00000023939 NDUFS6O75380 124 aaKnown RBP11.52□□□□□ -0.56
RTFDC1-201ENST00000023939 CEACAM3P40198 252 aa11.52□□□□□ -0.56
RTFDC1-201ENST00000023939 HABP2Q14520 560 aaPredicted RBP11.52□□□□□ -0.56
RTFDC1-201ENST00000023939 PSG5Q15238 335 aa11.52□□□□□ -0.56
RTFDC1-201ENST00000023939 PRSS8Q16651 343 aa11.52□□□□□ -0.56
RTFDC1-201ENST00000023939 MOB3BQ86TA1 216 aa11.52□□□□□ -0.56
RTFDC1-201ENST00000023939 MMD2Q8IY49 270 aa11.52□□□□□ -0.56
RTFDC1-201ENST00000023939 MGST2Q99735 147 aa11.52□□□□□ -0.56
RTFDC1-201ENST00000023939 GGTLC1Q9BX51 225 aa11.52□□□□□ -0.56
RTFDC1-201ENST00000023939 SMCO3A2RU48 225 aa11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 OPN1MWP04001 364 aa11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 SRP19P09132 144 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 OPN1MW2P0DN77 364 aa11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 OPN1MW3P0DN78 364 aa11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 BCL2P10415 239 aa11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 ZFP36P26651 326 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 TAGLN2P37802 199 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 RAB31Q13636 194 aa11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 HAGHQ16775 308 aa11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 TEPPQ6URK8 271 aa11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 MRPL41Q8IXM3 137 aaKnown RBP11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 CLRN3Q8NCR9 226 aa11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 CACNG8Q8WXS5 425 aa11.52□□□□□ -0.57
RTFDC1-201ENST00000023939 CHD6Q8TD26 2715 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 NBEAQ8NFP9 2946 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 KALRNO60229 2985 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 RELNP78509 3460 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 IGHV3-72A0A0B4J1Y9 119 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 OOSP1A8MZH6 123 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 IFNA1P01562 189 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 GPX4P36969 197 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 LMO4P61968 165 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 PRB3Q04118 309 aaPredicted RBP11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 LDLRAD2Q5SZI1 272 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 PVRIGQ6DKI7 326 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 TMEM144Q7Z5S9 345 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 OR10W1Q8NGF6 305 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 SIRT7Q9NRC8 400 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 SIGLEC9Q9Y336 463 aa11.51□□□□□ -0.57
RTFDC1-201ENST00000023939 E7EUB6 86 aa11.5□□□□□ -0.57
RTFDC1-201ENST00000023939 YIF1AO95070 293 aa11.5□□□□□ -0.57
RTFDC1-201ENST00000023939 RPL29P47914 159 aaKnown RBP11.5□□□□□ -0.57
RTFDC1-201ENST00000023939 NPBWR1P48145 328 aa11.5□□□□□ -0.57
RTFDC1-201ENST00000023939 WT1-ASQ06250 92 aa11.5□□□□□ -0.57
RTFDC1-201ENST00000023939 SOHLH1Q5JUK2 328 aa11.5□□□□□ -0.57
RTFDC1-201ENST00000023939 RNASEH2CQ8TDP1 164 aaKnown RBP11.5□□□□□ -0.57
RTFDC1-201ENST00000023939 RAB24Q969Q5 203 aa11.5□□□□□ -0.57
RTFDC1-201ENST00000023939 P2RX4Q99571 388 aa11.5□□□□□ -0.57
RTFDC1-201ENST00000023939 SIRPDQ9H106 197 aa11.5□□□□□ -0.57
RTFDC1-201ENST00000023939 TPSG1Q9NRR2 321 aa11.5□□□□□ -0.57
RTFDC1-201ENST00000023939 GNG13Q9P2W3 67 aa11.5□□□□□ -0.57
RTFDC1-201ENST00000023939 TNCP24821 2201 aa11.5□□□□□ -0.57
RTFDC1-201ENST00000023939 IGHV2-70DA0A0C4DH43 119 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 FAM74A7A6NL05 159 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 VENTXO95231 258 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 IGHV4-39P01824 125 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 PDLIM4P50479 330 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 SUB1P53999 127 aaKnown RBP eCLIP11.49□□□□□ -0.572e-7■■■■□ 25.1
RTFDC1-201ENST00000023939 CD69Q07108 199 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 HNF4GQ14541 408 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 FAM74A3Q4VXF1 159 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 MINOS1Q5TGZ0 78 aa11.49□□□□□ -0.57
RTFDC1-201ENST00000023939 RBMS3Q6XE24 437 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms