RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 LINC00305Q7Z4B0 112 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 LINC01356Q8N9X3 169 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 COL6A6A6NMZ7 2263 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 TCRBV4S1A1TA0A5B7 111 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 M0R1W7 72 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 TFF1P04155 84 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 ZNF250P15622 560 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 CRISP2P16562 243 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 ZP1P60852 638 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 HEPN1Q6WQI6 88 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 CLDND2Q8NHS1 167 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 SRSF12Q8WXF0 261 aaKnown RBP8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 C12orf57Q99622 126 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 RPUSD1Q9UJJ7 312 aaKnown RBP8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 MOB4Q9Y3A3 225 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 IGHV3OR16-13A0A075B7E8 117 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 IGHV2-26A0A0B4J1V2 119 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 IGHV3-74A0A0B4J1X5 117 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 ZNF253O75346 499 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 NDUFB4O95168 129 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 IGHV3-11P01762 117 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 ZMAT5Q9UDW3 170 aaKnown RBP8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 CLDN16Q9Y5I7 305 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 PHLDA3Q9Y5J5 127 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 WDR81Q562E7 1941 aa8.63□□□□□ -1.03
NIPAL3-201ENST00000003912 KIAA1671Q9BY89 1806 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 A6NNC1 897 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 NPIPB6E9PJ23 425 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 ARL14EPLP0DKL9 152 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 CXCL2P19875 107 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 Q6ZN92 141 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 CBY1Q9Y3M2 126 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 CEACAM8P31997 349 aaPredicted RBP8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 NHLRC3Q5JS37 347 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 S4R3C0 116 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 IGHV1-8P0DP01 117 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 HERVK_113P61574 105 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 C3orf36Q3SXR2 165 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 FOXL2NBQ6ZUU3 175 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 PSMG3Q9BT73 122 aaPredicted RBP8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 E7EQL1 145 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 CD69Q07108 199 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 Q1RN00 199 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 TMEM155Q4W5P6 130 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 TMEM200BQ69YZ2 307 aa8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 PNRC2Q9NPJ4 139 aaKnown RBP8.62□□□□□ -1.03
NIPAL3-201ENST00000003912 SCO1O75880 301 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 IBA57Q5T440 356 aaKnown RBP8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 PTPRDP23468 1912 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 UBE2L6O14933 153 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 APCSP02743 223 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 IL6RP08887 468 aaPredicted RBP8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 ANOS1P23352 680 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 EFNB1P98172 346 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 SRSF7Q16629 238 aaKnown RBP eCLIP8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 TMEM97Q5BJF2 176 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 SAPCD1Q5SSQ6 148 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 FAM159AQ6UWV7 190 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 AURKAIP1Q9NWT8 199 aaPredicted RBP8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 DOCK8Q8NF50 2099 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 HEATR5BQ9P2D3 2071 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 ETV2O00321 342 aaPredicted RBP8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 ZNF207O43670 478 aaKnown RBP8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 TDGF1P13385 188 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 CD24P25063 80 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 ITLN2Q8WWU7 325 aaPredicted RBP8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 RTBDNQ9BSG5 229 aaPredicted RBP8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 IGHV3-49A0A0A0MS15 119 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 M0R2Z0 102 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 RRHO14718 337 aa8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 GPX4P36969 197 aaPredicted RBP8.61□□□□□ -1.03
NIPAL3-201ENST00000003912 IGKV1-12A0A0C4DH73 117 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 IGKV1D-12P01611 117 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 AMY1AP04745 511 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 HSPB1P04792 205 aaKnown RBP8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 MEOX2P50222 304 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 H2BFSP57053 126 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 CD300CQ08708 224 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 MYOZ3Q8TDC0 251 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 C7orf77A4D0Y5 90 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 C15orf61A6NNL5 157 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 OR9G9P0C7N8 305 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 IER3P46695 156 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 AMMECR1LQ6DCA0 310 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 ZNF880Q6PDB4 577 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 MARVELD3Q96A59 401 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 BPESC1Q9GZL8 116 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 SNURFLB1AK76 121 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 IGKV3-20P01619 116 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 MFAP2P55001 183 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 FAM53AQ6NSI3 398 aaPredicted RBP8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 CYB561D1Q8N8Q1 229 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 FUT9Q9Y231 359 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 H3BTX0 84 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 GATA3P23771 443 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 ZNF318Q5VUA4 2279 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 IGHV3-66A0A0C4DH42 116 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 C1QL1O75973 258 aa8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 DUTP33316 252 aaKnown RBP8.6□□□□□ -1.03
NIPAL3-201ENST00000003912 RHOGP84095 191 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms