RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Olfr33Q8VGX7 318 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 SharpinQ91WA6 380 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Cysltr1Q99JA4 352 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Sval1Q9D2X6 151 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Lime1Q9EQR5 269 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 St6galnac5Q9QYJ1 336 aa7.55□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Rp1P56716 2095 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gm17333C6EQI3 125 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr564E9PWA8 316 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Edil3O35474 480 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Esr1P19785 599 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Tpsb2P21845 276 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gabrg3P27681 467 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 G6pd2P97324 513 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 AsipQ03288 131 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Pafah1b3Q61205 232 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 NfascQ810U3 1240 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Orai2Q8BH10 250 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Plppr5Q8BJ52 321 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Saxo2Q8BQB6 394 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Yipf6Q8BR70 236 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Lamtor4Q8CF66 99 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Rab43Q8CG50 210 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Vmn1r30Q8R2D2 302 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Mrpl51Q9CPY1 128 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Arpc2Q9CVB6 300 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Mzb1Q9D8I1 188 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Ssna1Q9JJ94 119 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Timm10bQ9WV96 100 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Lhx2Q9Z0S2 406 aa7.54□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr753-ps1A0A140LHN3 164 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr727A2RTN7 324 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Daw1D3Z7A5 415 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Rnf212F6TQD1 307 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 CrygsO35486 178 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 TyrobpO54885 114 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 P01662 111 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 P01808 119 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Csn2P10598 231 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gm1123Q1RME4 390 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gm10604Q3V0X7 143 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Taar2Q5QD17 339 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Dlx1Q64317 255 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Arl5cQ6P068 179 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 ApoolQ78IK4 265 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Chst2Q80WV3 530 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Lrtm2Q8BGX3 370 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Zfp747Q8BHM7 422 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Reep4Q8K072 257 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr211Q8VGH2 309 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr57Q8VGU7 319 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 PrkxQ922R0 355 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Mrpl54Q9CPW3 135 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 CrygfQ9CXV3 174 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Cst11Q9D269 139 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Q9D979 236 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Tas2r4Q9JKT3 297 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Nrf1Q9WU00 503 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Cldn13Q9Z0S4 211 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 A030005K14RikA0A1Y7VNY1 122 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 GzmmO08643 264 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Tnfsf11O35235 316 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Ctla4P09793 223 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Agtr1aP29754 359 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Tamm41Q3TUH1 337 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Zfp791Q497V9 528 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Hspe1Q64433 102 aaKnown RBP7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Znf740Q6NZQ6 180 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr874Q7TRE6 310 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Zadh2Q8BGC4 377 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Bola2Q8BGS2 86 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Ncs1Q8BNY6 190 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr483Q8VG05 315 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr166Q8VGX2 312 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Lgals2Q9CQW5 130 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Q9DA42 136 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Cypt12Q9DAR6 119 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Ly6g6dQ9Z1Q3 135 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gm17087V9GXQ2 156 aa7.53□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Gm13539A0A1B0GSM6 183 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 1700023F06RikA2AB62 382 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Vmn1r9A2RST7 299 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Ankrd29D3YVV3 309 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Zfp160E9Q459 650 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr731F8VQB9 326 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr936J3KMV2 267 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Emc8O70378 207 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 P01807 119 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 DaoP18894 345 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Rpl27P61358 136 aaKnown RBP7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Snrpd2P62317 118 aaKnown RBP7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Pdlim4P70271 330 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Pip4p1Q3TWL2 284 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Slc22a14Q497L9 629 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Zfp418Q8BFS8 652 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Stac2Q8R1B0 408 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Mrps23Q8VE22 177 aaKnown RBP7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Olfr570Q8VH12 312 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Ndufa8Q9DCJ5 172 aa7.52□□□□□ -1.2
Upf3b-201ENSMUST00000076265 Ropn1lQ9EQ00 218 aa7.52□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 43.5 ms