RNA–Protein interactions for RNA: ENST00000642102.1

CASC19-280, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,351 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-280	ENST00000642102	SPZ1	Q9BXG8	430 aa		0.38	□□□□□ -2.35
CASC19-280	ENST00000642102	HES4	Q9HCC6	221 aa		0.38	□□□□□ -2.35
CASC19-280	ENST00000642102	SPANXB1	Q9NS25	103 aa	Predicted RBP	0.38	□□□□□ -2.35
CASC19-280	ENST00000642102	TXNL4B	Q9NX01	149 aa	Known RBP	0.38	□□□□□ -2.35
CASC19-280	ENST00000642102	TAAR3P	Q9P1P4	343 aa		0.38	□□□□□ -2.35
CASC19-280	ENST00000642102	HHLA3	Q9XRX5	114 aa		0.38	□□□□□ -2.35
CASC19-280	ENST00000642102	PRELID1	Q9Y255	219 aa		0.38	□□□□□ -2.35
CASC19-280	ENST00000642102	TIMM22	Q9Y584	194 aa		0.38	□□□□□ -2.35
CASC19-280	ENST00000642102	FLT4	P35916	1363 aa		0.38	□□□□□ -2.35
CASC19-280	ENST00000642102	MTUS2	Q5JR59	1369 aa		0.38	□□□□□ -2.35
CASC19-280	ENST00000642102	KIF24	Q5T7B8	1368 aa		0.38	□□□□□ -2.35
CASC19-280	ENST00000642102	PLB1	Q6P1J6	1458 aa		0.38	□□□□□ -2.35
CASC19-280	ENST00000642102	RP1	P56715	2156 aa		0.38	□□□□□ -2.35
CASC19-280	ENST00000642102	ZNF532	Q9HCE3	1301 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	PLXND1	Q9Y4D7	1925 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	COL4A1	P02462	1669 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	MICAL3	Q7RTP6	2002 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	CCDC144A	A2RUR9	1427 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	RTEL1-TNFRSF6B	F6WH68	1400 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	ZNF106	Q9H2Y7	1883 aa	Known RBP	0.37	□□□□□ -2.35
CASC19-280	ENST00000642102		A0A0D9SEW6	157 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	IGHV1-69-2	A0A0G2JMI3	117 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	FAM236D	A0A1B0GTK5	79 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	GRIFIN	A4D1Z8	144 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	ARRDC5	A6NEK1	342 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	TMEM235	A6NFC5	223 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	SIGLEC16	A6NMB1	481 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	EEF1E1-BLOC1S5	C9J1V9	151 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102		J3QQQ9	107 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	FAAH	O00519	579 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	TXNDC9	O14530	226 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	LEPROT	O15243	131 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	S1PR2	O95136	353 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	NPY	P01303	97 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	IGKV1-5	P01602	117 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	TNNC2	P02585	160 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	APOE	P02649	317 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	SHBG	P04278	402 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	TCRB	P04435	133 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	IFNA16	P05015	189 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	SERPINA6	P08185	405 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	FAM236C	P0DP71	79 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	CD24	P25063	80 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	DDT	P30046	118 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	SLCO1A2	P46721	670 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	HINT1	P49773	126 aa	Predicted RBP	0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	RAB13	P51153	203 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	RAB14	P61106	215 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	RPL26	P61254	145 aa	Known RBP	0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	RPL30	P62888	115 aa	Known RBP	0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	SUPT4H1	P63272	117 aa	Known RBP	0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	BTN3A2	P78410	334 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	ZNF90	Q03938	601 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	PRB3	Q04118	309 aa	Predicted RBP	0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	SLC38A11	Q08AI6	406 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	KCNJ8	Q15842	424 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	TMEM155	Q4W5P6	130 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	HSP90B2P	Q58FF3	399 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	OGFRL1	Q5TC84	451 aa	Predicted RBP	0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	FAM27B	Q5VT28	67 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	LPCAT4	Q643R3	524 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	LYZL1	Q6UWQ5	148 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	C5orf46	Q6UWT4	87 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	DCXR	Q7Z4W1	244 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	SLC35E3	Q7Z769	313 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	SLC51B	Q86UW2	128 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	LHFPL1	Q86WI0	220 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	LRRC28	Q86X40	367 aa	Predicted RBP	0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	SLC22A24	Q8N4F4	322 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	C9orf163	Q8N9P6	203 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	OR13C8	Q8NGS7	320 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	DCANP1	Q8TF63	244 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	ANKRD7	Q92527	254 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	OPTN	Q96CV9	577 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	CNBD2	Q96M20	576 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	VCX3B	Q9H321	246 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	OR51I2	Q9H344	312 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	GPR84	Q9NQS5	396 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	PAQR5	Q9NXK6	330 aa	Predicted RBP	0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	NAT8	Q9UHE5	227 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	RPL26L1	Q9UNX3	145 aa	Known RBP	0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	FUT9	Q9Y231	359 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	ANGPT4	Q9Y264	503 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	ROBO3	Q96MS0	1386 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	SCAF11	Q99590	1463 aa	Known RBP	0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	PCF11	O94913	1555 aa	Known RBP	0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	GLI3	P10071	1580 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	DOCK3	Q8IZD9	2030 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	SCN10A	Q9Y5Y9	1956 aa		0.37	□□□□□ -2.35
CASC19-280	ENST00000642102	HEATR5B	Q9P2D3	2071 aa		0.36	□□□□□ -2.35
CASC19-280	ENST00000642102	COL6A6	A6NMZ7	2263 aa		0.36	□□□□□ -2.35
CASC19-280	ENST00000642102	CR1	P17927	2039 aa		0.36	□□□□□ -2.35
CASC19-280	ENST00000642102	TRBV20OR9-2	A0A075B6H5	130 aa		0.36	□□□□□ -2.35
CASC19-280	ENST00000642102	IGLV3-9	A0A075B6K5	115 aa		0.36	□□□□□ -2.35
CASC19-280	ENST00000642102	TRAV7	A0A075B6U4	112 aa		0.36	□□□□□ -2.35
CASC19-280	ENST00000642102		A0A087WUJ7	227 aa		0.36	□□□□□ -2.35
CASC19-280	ENST00000642102	TRAV41	A0A0B4J266	112 aa		0.36	□□□□□ -2.35
CASC19-280	ENST00000642102	IGHV1-18	A0A0C4DH31	117 aa		0.36	□□□□□ -2.35
CASC19-280	ENST00000642102	GGT3P	A6NGU5	568 aa		0.36	□□□□□ -2.35
CASC19-280	ENST00000642102	SMIM9	A6NGZ8	99 aa		0.36	□□□□□ -2.35

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms