RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 FCAMRQ8WWV6 532 aa11.55□□□□□ -0.56
PHGDH-231ENST00000641939 RSRP1Q9BUV0 290 aa11.55□□□□□ -0.56
PHGDH-231ENST00000641939 TMEM140Q9NV12 185 aa11.55□□□□□ -0.56
PHGDH-231ENST00000641939 PEF1Q9UBV8 284 aaKnown RBP11.55□□□□□ -0.56
PHGDH-231ENST00000641939 TRAV3A0A0B4J244 114 aa11.54□□□□□ -0.56
PHGDH-231ENST00000641939 MARCH11A6NNE9 402 aa11.54□□□□□ -0.56
PHGDH-231ENST00000641939 H3BMQ9 156 aa11.54□□□□□ -0.56
PHGDH-231ENST00000641939 CD3DP04234 171 aa11.54□□□□□ -0.56
PHGDH-231ENST00000641939 IFNA6P05013 189 aa11.54□□□□□ -0.56
PHGDH-231ENST00000641939 FGF2P09038 288 aa11.54□□□□□ -0.56
PHGDH-231ENST00000641939 MYOD1P15172 320 aa11.54□□□□□ -0.56
PHGDH-231ENST00000641939 LPAR6P43657 344 aa11.54□□□□□ -0.56
PHGDH-231ENST00000641939 RNASE10Q5GAN6 216 aaKnown RBP11.54□□□□□ -0.56
PHGDH-231ENST00000641939 SLC38A6Q8IZM9 456 aa11.54□□□□□ -0.56
PHGDH-231ENST00000641939 PRR25Q96S07 402 aa11.54□□□□□ -0.56
PHGDH-231ENST00000641939 ELOVL1Q9BW60 279 aa11.54□□□□□ -0.56
PHGDH-231ENST00000641939 ZNF256Q9Y2P7 627 aaPredicted RBP11.54□□□□□ -0.56
PHGDH-231ENST00000641939 DNAH9Q9NYC9 4486 aa11.54□□□□□ -0.56
PHGDH-231ENST00000641939 CGB1A6NKQ9 187 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 GABARAPH6UMI1 98 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 DHFRP00374 187 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 TRBV12-3P01733 135 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 CRYGCP07315 174 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 AREGP15514 252 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 RPA2P15927 270 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 PSMB6P28072 239 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 OR2B8PP59922 312 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 MRPS10P82664 201 aaKnown RBP11.53□□□□□ -0.56
PHGDH-231ENST00000641939 EXOSC2Q13868 293 aaKnown RBP11.53□□□□□ -0.56
PHGDH-231ENST00000641939 KLF5Q13887 457 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-231ENST00000641939 C15orf32Q32M92 178 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 ZNF585BQ52M93 769 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 TBC1D26Q86UD7 250 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 ARRDC1Q8N5I2 433 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 ISOC1Q96CN7 298 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 COMMD5Q9GZQ3 224 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 FAM212BQ9NTI7 297 aaPredicted RBP11.53□□□□□ -0.56
PHGDH-231ENST00000641939 COL7A1Q02388 2944 aa11.53□□□□□ -0.56
PHGDH-231ENST00000641939 OR2J3O76001 311 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 KRASP01116 189 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 CTRB1P17538 263 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 TAS2R19P59542 299 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 SSBP1Q04837 148 aaKnown RBP11.52□□□□□ -0.57
PHGDH-231ENST00000641939 RPEL1Q2QD12 228 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 CTRB2Q6GPI1 263 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 C19orf35Q6ZS72 473 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 LHFPL1Q86WI0 220 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 CADM3Q8N126 398 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 TMEM229BQ8NBD8 167 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 OR6Q1Q8NGQ2 317 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 DIRAS2Q96HU8 199 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 OR4C12Q96R67 309 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 SRSF8Q9BRL6 282 aaKnown RBP11.52□□□□□ -0.57
PHGDH-231ENST00000641939 C6orf62Q9GZU0 229 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-231ENST00000641939 RABL2AQ9UBK7 228 aaPredicted RBP11.52□□□□□ -0.57
PHGDH-231ENST00000641939 RABL2BQ9UNT1 228 aa11.52□□□□□ -0.57
PHGDH-231ENST00000641939 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.51□□□□□ -0.57
PHGDH-231ENST00000641939 LY86O95711 162 aa11.51□□□□□ -0.57
PHGDH-231ENST00000641939 CD74P04233 296 aa11.51□□□□□ -0.57
PHGDH-231ENST00000641939 REG1AP05451 166 aa11.51□□□□□ -0.57
PHGDH-231ENST00000641939 PGAM2P15259 253 aa11.51□□□□□ -0.57
PHGDH-231ENST00000641939 HIST1H1BP16401 226 aaKnown RBP11.51□□□□□ -0.57
PHGDH-231ENST00000641939 G6PCP35575 357 aa11.51□□□□□ -0.57
PHGDH-231ENST00000641939 SYNJ2BPP57105 145 aa11.51□□□□□ -0.57
PHGDH-231ENST00000641939 IL18Q14116 193 aa11.51□□□□□ -0.57
PHGDH-231ENST00000641939 KLK9Q2XQG4 91 aa11.51□□□□□ -0.57
PHGDH-231ENST00000641939 FAM209BQ5JX69 171 aa11.51□□□□□ -0.57
PHGDH-231ENST00000641939 ZNF486Q96H40 463 aaPredicted RBP11.51□□□□□ -0.57
PHGDH-231ENST00000641939 FANCD2OSQ96PS1 177 aa11.51□□□□□ -0.57
PHGDH-231ENST00000641939 QTRT1Q9BXR0 403 aaKnown RBP11.51□□□□□ -0.57
PHGDH-231ENST00000641939 SLIRPQ9GZT3 109 aaKnown RBP11.51□□□□□ -0.57
PHGDH-231ENST00000641939 FBXL7Q9UJT9 491 aa11.51□□□□□ -0.57
PHGDH-231ENST00000641939 KLK9Q9UKQ9 250 aa11.51□□□□□ -0.57
PHGDH-231ENST00000641939 IGLC7A0M8Q6 106 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 BMPR1BO00238 502 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 CTDSPLO15194 276 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 SNAPC5O75971 98 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 RAB3DO95716 219 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 DEFA4P12838 97 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 SPNP16150 400 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 RND3P61587 244 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 TATDN3Q17R31 274 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 THOC7Q6I9Y2 204 aaKnown RBP11.5□□□□□ -0.57
PHGDH-231ENST00000641939 STEAP1BQ6NZ63 245 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 OR4D10Q8NGI6 311 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 OR9G4Q8NGQ1 327 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 OR1L8Q8NGR8 309 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 SMIM4Q8WVI0 70 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 LSM4Q9Y4Z0 139 aaKnown RBP11.5□□□□□ -0.57
PHGDH-231ENST00000641939 CEPT1Q9Y6K0 416 aa11.5□□□□□ -0.57
PHGDH-231ENST00000641939 TEX50A0A1B0GTY4 177 aa11.49□□□□□ -0.57
PHGDH-231ENST00000641939 NDUFB8O95169 186 aa11.49□□□□□ -0.57
PHGDH-231ENST00000641939 TRAPPC2P0DI81 140 aa11.49□□□□□ -0.57
PHGDH-231ENST00000641939 TRAPPC2BP0DI82 140 aa11.49□□□□□ -0.57
PHGDH-231ENST00000641939 PTBP1P26599 531 aaKnown RBP eCLIP11.49□□□□□ -0.57
PHGDH-231ENST00000641939 CD69Q07108 199 aa11.49□□□□□ -0.57
PHGDH-231ENST00000641939 MEF2DQ14814 521 aa11.49□□□□□ -0.57
PHGDH-231ENST00000641939 HSD17B13Q7Z5P4 300 aaPredicted RBP11.49□□□□□ -0.57
PHGDH-231ENST00000641939 TERB2Q8NHR7 220 aa11.49□□□□□ -0.57
PHGDH-231ENST00000641939 B9D2Q9BPU9 175 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms