RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 CD37P11049 281 aa11.12□□□□□ -0.63
SRRM4-204ENST00000641899 CTRB1P17538 263 aa11.12□□□□□ -0.63
SRRM4-204ENST00000641899 GPR183P32249 361 aa11.12□□□□□ -0.63
SRRM4-204ENST00000641899 NANOS2P60321 138 aaKnown RBP11.12□□□□□ -0.63
SRRM4-204ENST00000641899 CTRB2Q6GPI1 263 aa11.12□□□□□ -0.63
SRRM4-204ENST00000641899 UNQ9165/PRO28630Q6UXU0 137 aa11.12□□□□□ -0.63
SRRM4-204ENST00000641899 AHSA2Q719I0 299 aa11.12□□□□□ -0.63
SRRM4-204ENST00000641899 PRSS48Q7RTY5 328 aa11.12□□□□□ -0.63
SRRM4-204ENST00000641899 NANOGP1Q8N7R0 232 aa11.12□□□□□ -0.63
SRRM4-204ENST00000641899 MND1Q9BWT6 205 aa11.12□□□□□ -0.63
SRRM4-204ENST00000641899 S4R3C0 116 aa11.12□□□□□ -0.63
SRRM4-204ENST00000641899 IGLL5B9A064 214 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 H3BMQ9 156 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 ARL6IP5O75915 188 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 PRR20EP86478 221 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 PRR20CP86479 221 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 PRR20DP86480 221 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 PRR20BP86481 221 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 PRR20AP86496 221 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 KLK9Q2XQG4 91 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 OR11H2Q8NH07 326 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 OR5B3Q8NH48 314 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 OR4A5Q8NH83 315 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 TMEM167AQ8TBQ9 72 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 RAB2BQ8WUD1 216 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 FCGR1BQ92637 280 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 HSD17B10Q99714 261 aaKnown RBP11.11□□□□□ -0.63
SRRM4-204ENST00000641899 PSORS1C1Q9UIG5 152 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 KLK9Q9UKQ9 250 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 RAB22AQ9UL26 194 aa11.11□□□□□ -0.63
SRRM4-204ENST00000641899 XRCC3O43542 346 aa11.1□□□□□ -0.63
SRRM4-204ENST00000641899 IL6RP08887 468 aaPredicted RBP11.1□□□□□ -0.63
SRRM4-204ENST00000641899 UCHL1P09936 223 aa11.1□□□□□ -0.63
SRRM4-204ENST00000641899 CTXN2P0C2S0 81 aa11.1□□□□□ -0.63
SRRM4-204ENST00000641899 PTBP1P26599 531 aaKnown RBP eCLIP11.1□□□□□ -0.63
SRRM4-204ENST00000641899 RPL8P62917 257 aaKnown RBP11.1□□□□□ -0.63
SRRM4-204ENST00000641899 INSL4Q14641 139 aa11.1□□□□□ -0.63
SRRM4-204ENST00000641899 ARL6IP1Q15041 203 aa11.1□□□□□ -0.63
SRRM4-204ENST00000641899 ODF3L2Q3SX64 289 aa11.1□□□□□ -0.63
SRRM4-204ENST00000641899 PLAC9Q5JTB6 97 aa11.1□□□□□ -0.63
SRRM4-204ENST00000641899 H1FOOQ8IZA3 346 aaPredicted RBP11.1□□□□□ -0.63
SRRM4-204ENST00000641899 GVQW1Q8N7I0 195 aa11.1□□□□□ -0.63
SRRM4-204ENST00000641899 CD300LFQ8TDQ1 290 aa11.1□□□□□ -0.63
SRRM4-204ENST00000641899 TMEM190Q8WZ59 177 aa11.1□□□□□ -0.63
SRRM4-204ENST00000641899 FAM3DQ96BQ1 224 aa11.1□□□□□ -0.63
SRRM4-204ENST00000641899 C5orf30Q96GV9 206 aa11.1□□□□□ -0.63
SRRM4-204ENST00000641899 ZNF436Q9C0F3 470 aaPredicted RBP11.1□□□□□ -0.63
SRRM4-204ENST00000641899 KIAA1109Q2LD37 5005 aa11.1□□□□□ -0.63
SRRM4-204ENST00000641899 IGLV11-55A0A075B6I3 123 aa11.09□□□□□ -0.63
SRRM4-204ENST00000641899 AREGP15514 252 aa11.09□□□□□ -0.63
SRRM4-204ENST00000641899 PSMB9P28065 219 aa11.09□□□□□ -0.63
SRRM4-204ENST00000641899 FCGR2BP31994 310 aaPredicted RBP11.09□□□□□ -0.63
SRRM4-204ENST00000641899 MFAP2P55001 183 aa11.09□□□□□ -0.63
SRRM4-204ENST00000641899 OR2B11Q5JQS5 317 aa11.09□□□□□ -0.63
SRRM4-204ENST00000641899 SPSB3Q6PJ21 355 aa11.09□□□□□ -0.63
SRRM4-204ENST00000641899 VKORC1L1Q8N0U8 176 aa11.09□□□□□ -0.63
SRRM4-204ENST00000641899 TCTEX1D2Q8WW35 142 aa11.09□□□□□ -0.63
SRRM4-204ENST00000641899 CMTM3Q96MX0 182 aa11.09□□□□□ -0.63
SRRM4-204ENST00000641899 SRSF8Q9BRL6 282 aaKnown RBP11.09□□□□□ -0.63
SRRM4-204ENST00000641899 FUNDC2Q9BWH2 189 aa11.09□□□□□ -0.63
SRRM4-204ENST00000641899 NAA50Q9GZZ1 169 aaKnown RBP11.09□□□□□ -0.63
SRRM4-204ENST00000641899 ACOT13Q9NPJ3 140 aa11.09□□□□□ -0.63
SRRM4-204ENST00000641899 FKBP14Q9NWM8 211 aa11.09□□□□□ -0.63
SRRM4-204ENST00000641899 IGHV3-35A0A0C4DH35 117 aa11.08□□□□□ -0.64
SRRM4-204ENST00000641899 MFSD2BA6NFX1 497 aa11.08□□□□□ -0.64
SRRM4-204ENST00000641899 TGOLN2O43493 480 aa11.08□□□□□ -0.64
SRRM4-204ENST00000641899 HLA-GP17693 338 aa11.08□□□□□ -0.64
SRRM4-204ENST00000641899 TRAM1Q15629 374 aa11.08□□□□□ -0.64
SRRM4-204ENST00000641899 C2orf76Q3KRA6 126 aa11.08□□□□□ -0.64
SRRM4-204ENST00000641899 Q6ZS49 121 aa11.08□□□□□ -0.64
SRRM4-204ENST00000641899 PUSL1Q8N0Z8 303 aaKnown RBP11.08□□□□□ -0.64
SRRM4-204ENST00000641899 ZNF502Q8TBZ5 544 aa11.08□□□□□ -0.64
SRRM4-204ENST00000641899 VN1R17PQ8TDU5 208 aa11.08□□□□□ -0.64
SRRM4-204ENST00000641899 UFD1Q92890 307 aa11.08□□□□□ -0.64
SRRM4-204ENST00000641899 BSCL2Q96G97 398 aaPredicted RBP11.08□□□□□ -0.64
SRRM4-204ENST00000641899 BCL7BQ9BQE9 202 aa11.08□□□□□ -0.64
SRRM4-204ENST00000641899 RBMX2Q9Y388 322 aaKnown RBP11.08□□□□□ -0.64
SRRM4-204ENST00000641899 OR2W1Q9Y3N9 320 aa11.08□□□□□ -0.64
SRRM4-204ENST00000641899 METTL21EPA6NDL7 271 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 K7EMT4 169 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 NDUFA4O00483 81 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 PSMA1P25786 263 aaKnown RBP11.07□□□□□ -0.64
SRRM4-204ENST00000641899 PAFAH1B2P68402 229 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 IRF3Q14653 427 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 TMEM187Q14656 261 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 SPHARQ15513 63 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 UBE2UQ5VVX9 321 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 C19orf35Q6ZS72 473 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 HSD17B13Q7Z5P4 300 aaPredicted RBP11.07□□□□□ -0.64
SRRM4-204ENST00000641899 OR10R2Q8NGX6 335 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 YIPF6Q96EC8 236 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 ATP6V0BQ99437 205 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 C20orf24Q9BUV8 137 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 COMMD5Q9GZQ3 224 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 HRH4Q9H3N8 390 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 HRASLSQ9HDD0 168 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 APLNQ9ULZ1 77 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 AK6Q9Y3D8 172 aaKnown RBP11.07□□□□□ -0.64
SRRM4-204ENST00000641899 RYR1P21817 5038 aa11.07□□□□□ -0.64
SRRM4-204ENST00000641899 A0A075B6Q4 140 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms