RNA–Protein interactions for RNA: ENST00000640545.1

GFAP-236, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-236ENST00000640545 ZNF320A2RRD8 509 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 MEIS3P1A6NDR6 274 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 PPP5D1E7EU14 171 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 E7EUB6 86 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 FOLR2P14207 255 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 AREGP15514 252 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 CTRB1P17538 263 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 S100GP29377 79 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 CD81P60033 236 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 GUCA2BQ16661 112 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 CD300EQ496F6 205 aaPredicted RBP11.15□□□□□ -0.62
GFAP-236ENST00000640545 CTRB2Q6GPI1 263 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 THOC7Q6I9Y2 204 aaKnown RBP11.15□□□□□ -0.62
GFAP-236ENST00000640545 ZNF818PQ6ZRF7 136 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 SAMD12Q8N8I0 201 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 TSPAN14Q8NG11 270 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 OR5H2Q8NGV7 314 aa11.15□□□□□ -0.62
GFAP-236ENST00000640545 C2orf70A6NJV1 201 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 UPK2O00526 184 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 NDUFB8O95169 186 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 TNFAIP8O95379 198 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 IGHV3-23P01764 117 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 HLA-AP01891 365 aaKnown RBP11.14□□□□□ -0.63
GFAP-236ENST00000640545 FGF2P09038 288 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 PRSS3P35030 304 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 RPS19P39019 145 aaKnown RBP11.14□□□□□ -0.63
GFAP-236ENST00000640545 MECP2P51608 486 aaKnown RBP11.14□□□□□ -0.63
GFAP-236ENST00000640545 POU2AF1Q16633 256 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 HAGHQ16775 308 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 DEFB114Q30KQ6 69 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 DHRS11Q6UWP2 260 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 HSD17B13Q7Z5P4 300 aaPredicted RBP11.14□□□□□ -0.63
GFAP-236ENST00000640545 OR6F1Q8NGZ6 308 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 FANCD2OSQ96PS1 177 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 NEURL2Q9BR09 285 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 ZNF2Q9BSG1 426 aaPredicted RBP11.14□□□□□ -0.63
GFAP-236ENST00000640545 COMMD9Q9P000 198 aa11.14□□□□□ -0.63
GFAP-236ENST00000640545 IZUMO1RA6ND01 250 aa11.13□□□□□ -0.63
GFAP-236ENST00000640545 REG1AP05451 166 aa11.13□□□□□ -0.63
GFAP-236ENST00000640545 CLEC3BP05452 202 aa11.13□□□□□ -0.63
GFAP-236ENST00000640545 GNRHRP30968 328 aa11.13□□□□□ -0.63
GFAP-236ENST00000640545 RFX2P48378 723 aa11.13□□□□□ -0.63
GFAP-236ENST00000640545 TAS2R20P59543 309 aa11.13□□□□□ -0.63
GFAP-236ENST00000640545 OR2B8PP59922 312 aa11.13□□□□□ -0.63
GFAP-236ENST00000640545 LSM3P62310 102 aaKnown RBP11.13□□□□□ -0.63
GFAP-236ENST00000640545 SLC16A13Q7RTY0 426 aa11.13□□□□□ -0.63
GFAP-236ENST00000640545 THAP7Q9BT49 309 aaPredicted RBP11.13□□□□□ -0.63
GFAP-236ENST00000640545 QTRT1Q9BXR0 403 aaKnown RBP11.13□□□□□ -0.63
GFAP-236ENST00000640545 TMEM140Q9NV12 185 aa11.13□□□□□ -0.63
GFAP-236ENST00000640545 IGLV11-55A0A075B6I3 123 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 SNAPC5O75971 98 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 PMP2P02689 132 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 TRAPPC2P0DI81 140 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 TRAPPC2BP0DI82 140 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 CBLN1P23435 193 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 F2RP25116 425 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 TSPAN5P62079 268 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 KLK9Q2XQG4 91 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 ANKRD55Q3KP44 614 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 ZNF57Q68EA5 555 aaPredicted RBP11.12□□□□□ -0.63
GFAP-236ENST00000640545 LPCAT3Q6P1A2 487 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 C19orf35Q6ZS72 473 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 MOB3AQ96BX8 217 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 CCDC140Q96MF4 163 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 PLEKHA3Q9HB20 300 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 KLK9Q9UKQ9 250 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 CEPT1Q9Y6K0 416 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 S4R3C0 116 aa11.12□□□□□ -0.63
GFAP-236ENST00000640545 A0A1B0GW64 132 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 MARCH11A6NNE9 402 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 ZNF785A8K8V0 405 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 OR11H12B2RN74 326 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 PGLYRP1O75594 196 aaPredicted RBP11.11□□□□□ -0.63
GFAP-236ENST00000640545 S1PR2O95136 353 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 RLN1P04808 185 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 MYOD1P15172 320 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 PLET1Q6UQ28 207 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 OR1L8Q8NGR8 309 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 MARC2Q969Z3 335 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 SLC25A46Q96AG3 418 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 DGCR14Q96DF8 476 aaKnown RBP11.11□□□□□ -0.63
GFAP-236ENST00000640545 YIPF6Q96EC8 236 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 FKBP11Q9NYL4 201 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 COMMD3Q9UBI1 195 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 DMRT1Q9Y5R6 373 aa11.11□□□□□ -0.63
GFAP-236ENST00000640545 HUWE1Q7Z6Z7 4374 aaKnown RBP11.11□□□□□ -0.63
GFAP-236ENST00000640545 GPR31O00270 319 aa11.1□□□□□ -0.63
GFAP-236ENST00000640545 KRASP01116 189 aa11.1□□□□□ -0.63
GFAP-236ENST00000640545 OR13C7P0DN81 318 aa11.1□□□□□ -0.63
GFAP-236ENST00000640545 RPA2P15927 270 aa11.1□□□□□ -0.63
GFAP-236ENST00000640545 NAT1P18440 290 aa11.1□□□□□ -0.63
GFAP-236ENST00000640545 PTBP1P26599 531 aaKnown RBP eCLIP11.1□□□□□ -0.63
GFAP-236ENST00000640545 TGFBR1P36897 503 aa11.1□□□□□ -0.63
GFAP-236ENST00000640545 SLC25A24Q6NUK1 477 aa11.1□□□□□ -0.63
GFAP-236ENST00000640545 ADAMTSL5Q6ZMM2 481 aa11.1□□□□□ -0.63
GFAP-236ENST00000640545 RBPMS2Q6ZRY4 209 aaKnown RBP11.1□□□□□ -0.63
GFAP-236ENST00000640545 UXS1Q8NBZ7 420 aa11.1□□□□□ -0.63
GFAP-236ENST00000640545 OR1L6Q8NGR2 347 aa11.1□□□□□ -0.63
GFAP-236ENST00000640545 IL17DQ8TAD2 202 aa11.1□□□□□ -0.63
GFAP-236ENST00000640545 VN1R17PQ8TDU5 208 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms