RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 H2BFWTQ7Z2G1 175 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 MINDY2Q8NBR6 621 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 OR4X2Q8NGF9 303 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 CASTOR1Q8WTX7 329 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 TMEM56Q96MV1 263 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 TSC22D3Q99576 134 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 PHB2Q99623 299 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 CITED2Q99967 270 aaPredicted RBP10.34□□□□□ -0.75
GTF3A-209ENST00000640289 GON7Q9BXV9 100 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 TMEM56-RWDD3S4R434 201 aa10.34□□□□□ -0.75
GTF3A-209ENST00000640289 TRAV6A0A075B6T7 132 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 FAM240BA0A1B0GVZ2 78 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 HMX3A6NHT5 357 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 CGB1A6NKQ9 187 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 DBX1A6NMT0 343 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 TEX22C9J3V5 150 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 SFT2D2O95562 160 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 P0C879 139 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 ANXA3P12429 323 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 CD83Q01151 205 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 TMEM267Q0VDI3 215 aaPredicted RBP10.33□□□□□ -0.76
GTF3A-209ENST00000640289 ANKRD55Q3KP44 614 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 AKIRIN2Q53H80 203 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 TEX38Q6PEX7 206 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 ZNF695Q8IW36 515 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 RBPMSQ93062 196 aaKnown RBP10.33□□□□□ -0.76
GTF3A-209ENST00000640289 FYTTD1Q96QD9 318 aaKnown RBP10.33□□□□□ -0.76
GTF3A-209ENST00000640289 NUDT15Q9NV35 164 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 DNHD1Q96M86 4753 aa10.33□□□□□ -0.76
GTF3A-209ENST00000640289 COL6A5A8TX70 2615 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 TEX50A0A1B0GTY4 177 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 TCRBV4S1A1TA0A5B7 111 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 C15orf61A6NNL5 157 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 SNAPC5O75971 98 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 IGLV1-40P01703 118 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 IGHG4P01861 327 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 RPLP1P05386 114 aaKnown RBP10.32□□□□□ -0.76
GTF3A-209ENST00000640289 OR4E1P0C645 316 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 LYZL2Q7Z4W2 148 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 CADM3Q8N126 398 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 SLC35G3Q8N808 338 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 OR5T1Q8NG75 326 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 RNASE11Q8TAA1 199 aaKnown RBP10.32□□□□□ -0.76
GTF3A-209ENST00000640289 COMMD5Q9GZQ3 224 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 KLK15Q9H2R5 256 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 OR51B2Q9Y5P1 312 aa10.32□□□□□ -0.76
GTF3A-209ENST00000640289 A0A0B4J293 547 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 A0A1W2PRX2 142 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 C9orf170A2RU37 121 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 ADARB2-AS1A8MUL3 147 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 ATG12O94817 140 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 HLA-AP01891 365 aaKnown RBP10.31□□□□□ -0.76
GTF3A-209ENST00000640289 ELANEP08246 267 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 PSMB8P28062 276 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 RAB25P57735 213 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 UBE2MP61081 183 aaKnown RBP10.31□□□□□ -0.76
GTF3A-209ENST00000640289 FOXE3Q13461 319 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 NSUN5P1Q3KNT7 163 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 KHDC1LQ5JSQ8 128 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 Q6ZRM9 215 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 C19orf35Q6ZS72 473 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 C18orf65Q6ZTR6 163 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 NRARPQ7Z6K4 114 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 LGI3Q8N145 548 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 COMMD1Q8N668 190 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 OR4A16Q8NH70 328 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 ENKURQ8TC29 256 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 IL22RA2Q969J5 263 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 GPR146Q96CH1 333 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 RRNAD1Q96FB5 475 aaKnown RBP10.31□□□□□ -0.76
GTF3A-209ENST00000640289 MS4A10Q96PG2 267 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 SPIN2AQ99865 258 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 SPIN2BQ9BPZ2 258 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 QTRT1Q9BXR0 403 aaKnown RBP10.31□□□□□ -0.76
GTF3A-209ENST00000640289 PRNDQ9UKY0 176 aa10.31□□□□□ -0.76
GTF3A-209ENST00000640289 FOXA2Q9Y261 457 aaPredicted RBP10.31□□□□□ -0.76
GTF3A-209ENST00000640289 RBMXL2O75526 392 aaKnown RBP10.3□□□□□ -0.76
GTF3A-209ENST00000640289 REG1AP05451 166 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 FGF2P09038 288 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 H2AFB2P0C5Z0 115 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 PF4V1P10720 104 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 AREGP15514 252 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 DEFA1P59665 94 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 DEFA3P59666 94 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 DEFA5Q01523 94 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 DHRS2Q13268 280 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 C4orf46Q504U0 113 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 CXorf66Q5JRM2 361 aaPredicted RBP10.3□□□□□ -0.76
GTF3A-209ENST00000640289 LYG2Q86SG7 212 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 OR10W1Q8NGF6 305 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 OR52B4Q8NGK2 314 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 OR5M8Q8NGP6 311 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 FAM110DQ8TAY7 271 aaPredicted RBP10.3□□□□□ -0.76
GTF3A-209ENST00000640289 TMEM68Q96MH6 324 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 HINT2Q9BX68 163 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 ZNF355PQ9NSJ1 428 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 TMEM14BQ9NUH8 114 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 ANK2Q01484 3957 aa10.3□□□□□ -0.76
GTF3A-209ENST00000640289 A0A0B4J2A0 478 aa10.29□□□□□ -0.76
GTF3A-209ENST00000640289 PLXNB1O43157 2135 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms