RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 HSPB9Q9BQS6 159 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 CEP350Q5VT06 3117 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 BMPR1BO00238 502 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 DLL1O00548 723 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 FGF16O43320 207 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 FAM87AP0C7U9 286 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 GFRA1P56159 465 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 ERVFRD-1P60508 538 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 ABHD17AQ96GS6 310 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 TXNDC17Q9BRA2 123 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 ZNF430Q9H8G1 570 aaPredicted RBP12.13□□□□□ -0.47
SCARB2-216ENST00000639300 RFNGQ9Y644 331 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 IGKV3D-15A0A087WSY6 115 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 CXorf65A6NEN9 183 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 TMEM250H0YL14 139 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 FOXF2Q12947 444 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 UFC1Q9Y3C8 167 aa12.13□□□□□ -0.47
SCARB2-216ENST00000639300 M0QZ24 198 aa12.12□□□□□ -0.47
SCARB2-216ENST00000639300 ELOBQ15370 118 aa12.12□□□□□ -0.47
SCARB2-216ENST00000639300 OR9G1Q8NH87 305 aa12.12□□□□□ -0.47
SCARB2-216ENST00000639300 PPIAL4CA0A0B4J2A2 164 aa12.12□□□□□ -0.47
SCARB2-216ENST00000639300 SMIM17P0DL12 118 aa12.12□□□□□ -0.47
SCARB2-216ENST00000639300 PPIAL4GP0DN37 164 aa12.12□□□□□ -0.47
SCARB2-216ENST00000639300 GATA2P23769 480 aaPredicted RBP12.12□□□□□ -0.47
SCARB2-216ENST00000639300 PRB3Q04118 309 aaPredicted RBP12.12□□□□□ -0.47
SCARB2-216ENST00000639300 YTHDF2Q9Y5A9 579 aaKnown RBP12.12□□□□□ -0.47
SCARB2-216ENST00000639300 GRIFINA4D1Z8 144 aa12.12□□□□□ -0.47
SCARB2-216ENST00000639300 M0R143 59 aa12.12□□□□□ -0.47
SCARB2-216ENST00000639300 LILRA1O75019 489 aa12.12□□□□□ -0.47
SCARB2-216ENST00000639300 HGFACQ04756 655 aa12.12□□□□□ -0.47
SCARB2-216ENST00000639300 TRBV23-1A0A0A0MS06 115 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 PCSK4Q6UW60 755 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 WDR82Q6UXN9 313 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 OR1P1Q8NH06 330 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 RNF115Q9Y4L5 304 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 F5H697 171 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 GCHFRP30047 84 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 CDX1P47902 265 aaPredicted RBP12.11□□□□□ -0.47
SCARB2-216ENST00000639300 SPSB4Q96A44 273 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 SSBP3Q9BWW4 388 aaPredicted RBP12.11□□□□□ -0.47
SCARB2-216ENST00000639300 CYTL1Q9NRR1 136 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 MALRD1Q5VYJ5 2156 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 OR4A47Q6IF82 309 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 ZNF788Q6ZQV5 615 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 IGHV1-69-2A0A0G2JMI3 117 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 CCL3L1P16619 93 aa12.11□□□□□ -0.47
SCARB2-216ENST00000639300 C1orf162Q8NEQ5 155 aaPredicted RBP12.11□□□□□ -0.47
SCARB2-216ENST00000639300 A8MWL6 223 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 MOSP00540 346 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 OTX1P32242 354 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-216ENST00000639300 SRP14P37108 136 aaKnown RBP12.1□□□□□ -0.47
SCARB2-216ENST00000639300 MUC15Q8N387 334 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 GUCD1Q96NT3 240 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 ISLRO14498 428 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 PSPNO60542 156 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 IGFBP2P18065 325 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 PKIAP61925 76 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 CCDC144NLQ6NUI1 221 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 PLXNA4Q9HCM2 1894 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 NDUFA2O43678 99 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 IL18BPO95998 194 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 PRSS1P07477 247 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 IL6RP08887 468 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-216ENST00000639300 SELLP14151 372 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 ATP5G3P48201 142 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 ZNF497Q6ZNH5 498 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 CLDND2Q8NHS1 167 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 DENND4CQ5VZ89 1909 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 DIRC3C9JPN6 131 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 RIGQ13278 110 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 ZNF324BQ6AW86 544 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-216ENST00000639300 PNKDQ8N490 385 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 OR51G1Q8NGK1 321 aa12.1□□□□□ -0.47
SCARB2-216ENST00000639300 KBTBD11-OT1A0A1B0GTJ5 212 aa12.09□□□□□ -0.47
SCARB2-216ENST00000639300 CGAP01215 116 aa12.09□□□□□ -0.47
SCARB2-216ENST00000639300 OR4D5Q8NGN0 318 aa12.09□□□□□ -0.47
SCARB2-216ENST00000639300 SCNM1Q9BWG6 230 aa12.09□□□□□ -0.47
SCARB2-216ENST00000639300 PCNTO95613 3336 aa12.09□□□□□ -0.47
SCARB2-216ENST00000639300 CBLN1P23435 193 aa12.09□□□□□ -0.47
SCARB2-216ENST00000639300 B3GALT5-AS1P59052 145 aa12.09□□□□□ -0.47
SCARB2-216ENST00000639300 BSPH1Q075Z2 132 aa12.09□□□□□ -0.47
SCARB2-216ENST00000639300 MRPL18Q9H0U6 180 aaKnown RBP12.09□□□□□ -0.47
SCARB2-216ENST00000639300 TMEM106BQ9NUM4 274 aa12.09□□□□□ -0.47
SCARB2-216ENST00000639300 FCGR2BP31994 310 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-216ENST00000639300 ZNF146Q15072 292 aa12.09□□□□□ -0.47
SCARB2-216ENST00000639300 GTF3AQ92664 365 aaKnown RBP12.09□□□□□ -0.47
SCARB2-216ENST00000639300 TMEM186Q96B77 213 aa12.09□□□□□ -0.47
SCARB2-216ENST00000639300 PRR14LQ5THK1 2151 aa12.08□□□□□ -0.47
SCARB2-216ENST00000639300 SLC17A3O00476 420 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 ATXN7O15265 892 aaPredicted RBP12.08□□□□□ -0.48
SCARB2-216ENST00000639300 FOSL1P15407 271 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 SSX8Q7RTT4 187 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 OR4A5Q8NH83 315 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 FREM1Q5H8C1 2179 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 TCAPO15273 167 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 CYP2G1PQ6ZSU1 146 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 GATAD1Q8WUU5 269 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 TMEM171Q8WVE6 324 aa12.08□□□□□ -0.48
SCARB2-216ENST00000639300 SNRNP40Q96DI7 357 aaKnown RBP12.08□□□□□ -0.48
SCARB2-216ENST00000639300 TMEM191AQ9H0A3 160 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms