RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 RPL30P62888 115 aaKnown RBP12.08□□□□□ -0.47
SCARB2-208ENST00000638372 RIGQ13278 110 aa12.08□□□□□ -0.47
SCARB2-208ENST00000638372 FHL1Q13642 323 aa12.08□□□□□ -0.47
SCARB2-208ENST00000638372 STPG3Q8N7X2 389 aa12.08□□□□□ -0.47
SCARB2-208ENST00000638372 HELZP42694 1942 aaKnown RBP12.08□□□□□ -0.48
SCARB2-208ENST00000638372 A0A087X0M5 115 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 A0A1B0GX30 115 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 KLRB1Q12918 225 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 IGKV1-27A0A075B6S5 117 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 LOC105371242A0A075B767 164 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 IGHV3OR16-10A0A075B7F0 116 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 IGKV3D-15A0A087WSY6 115 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 WISP1O95388 367 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 MOSP00540 346 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 CCKARP32238 428 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 GFRA1P56159 465 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 CGB1A6NKQ9 187 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 F8VVB4 439 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 F8VWA3 439 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 APCSP02743 223 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 WDR82Q6UXN9 313 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 TXNDC17Q9BRA2 123 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 PAM16Q9Y3D7 125 aa12.08□□□□□ -0.48
SCARB2-208ENST00000638372 KBTBD11-OT1A0A1B0GTJ5 212 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 SS18L1O75177 396 aaPredicted RBP12.07□□□□□ -0.48
SCARB2-208ENST00000638372 LOXL3P58215 753 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 SRSF6Q13247 344 aaKnown RBP12.07□□□□□ -0.48
SCARB2-208ENST00000638372 ELOBQ15370 118 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 BPIFA4PQ86YQ2 179 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 ISLRO14498 428 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 ZNF385CQ66K41 422 aaPredicted RBP12.07□□□□□ -0.48
SCARB2-208ENST00000638372 GBGT1Q8N5D6 347 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 ZNF383Q8NA42 475 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 CHODLQ9H9P2 273 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 A8MWL6 223 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 LRRC75BQ2VPJ9 315 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 C5orf24Q7Z6I8 188 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 WDFY1Q8IWB7 410 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 VN1R17PQ8TDU5 208 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 PSMG3Q9BT73 122 aaPredicted RBP12.07□□□□□ -0.48
SCARB2-208ENST00000638372 GBF1Q92538 1859 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 C17orf100A8MU93 164 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 TFF3Q07654 80 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 RNF151Q2KHN1 245 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 OR4A47Q6IF82 309 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 OR51G1Q8NGK1 321 aa12.07□□□□□ -0.48
SCARB2-208ENST00000638372 MRPL37Q9BZE1 423 aaKnown RBP12.07□□□□□ -0.48
SCARB2-208ENST00000638372 ATP5J2P56134 94 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 ZNF146Q15072 292 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 BIVMQ86UB2 503 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 NPCDR1Q9BY65 106 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 S4R3C0 116 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 AGAP20933 346 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 CSRP1P21291 193 aaKnown RBP12.06□□□□□ -0.48
SCARB2-208ENST00000638372 TFPI2P48307 235 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 PCSK4Q6UW60 755 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 FBXL15Q9H469 300 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 PLCE1Q9P212 2302 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 IGHV3OR16-13A0A075B7E8 117 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 IGHV3-74A0A0B4J1X5 117 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 SH2D7A6NKC9 451 aaPredicted RBP12.06□□□□□ -0.48
SCARB2-208ENST00000638372 A8MXK9 166 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 KIAA1644Q3SXP7 199 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 MARVELD3Q96A59 401 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 GPR61Q9BZJ8 451 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 PNRC2Q9NPJ4 139 aaKnown RBP12.06□□□□□ -0.48
SCARB2-208ENST00000638372 TMEM56-RWDD3S4R434 201 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 TEX50A0A1B0GTY4 177 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 LDLRAD4O15165 306 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 FAM166AQ6J272 317 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 HIST1H2BAQ96A08 127 aa12.06□□□□□ -0.48
SCARB2-208ENST00000638372 FOSL1P15407 271 aa12.05□□□□□ -0.48
SCARB2-208ENST00000638372 PPOXP50336 477 aa12.05□□□□□ -0.48
SCARB2-208ENST00000638372 LY6EQ16553 131 aa12.05□□□□□ -0.48
SCARB2-208ENST00000638372 DNM1P46Q6ZS02 220 aa12.05□□□□□ -0.48
SCARB2-208ENST00000638372 DOCK11Q5JSL3 2073 aa12.05□□□□□ -0.48
SCARB2-208ENST00000638372 RAMP3O60896 148 aa12.05□□□□□ -0.48
SCARB2-208ENST00000638372 HOXA4Q00056 320 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-208ENST00000638372 Q6ZN92 141 aa12.05□□□□□ -0.48
SCARB2-208ENST00000638372 IL18BPO95998 194 aa12.05□□□□□ -0.48
SCARB2-208ENST00000638372 GATA2P23769 480 aaPredicted RBP12.05□□□□□ -0.48
SCARB2-208ENST00000638372 SPSB4Q96A44 273 aa12.05□□□□□ -0.48
SCARB2-208ENST00000638372 IGHV1-18A0A0C4DH31 117 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 LYNX1G3V0Z9 82 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 CD55P08174 381 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 LYNX1P0DP58 116 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 ZNF524Q96C55 264 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 OR51M1Q9H341 326 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 SELLP14151 372 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 GCHFRP30047 84 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 ZNF581Q9P0T4 197 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 TRBV23-1A0A0A0MS06 115 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 OR2T8A6NH00 312 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 IGFBP2P18065 325 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 NAT1P18440 290 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 GATAD1Q8WUU5 269 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 TMEM191AQ9H0A3 160 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 IL6RP08887 468 aaPredicted RBP12.04□□□□□ -0.48
SCARB2-208ENST00000638372 MFAP4P55083 255 aa12.04□□□□□ -0.48
SCARB2-208ENST00000638372 CD81P60033 236 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms