RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 OR9G4Q8NGQ1 327 aa16.69■□□□□ 0.26
CACNA1A-257ENST00000638009 MPTX1A8MV57 137 aa16.69■□□□□ 0.26
CACNA1A-257ENST00000638009 C18orf15Q96N68 181 aa16.69■□□□□ 0.26
CACNA1A-257ENST00000638009 COL9A3Q14050 684 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-257ENST00000638009 WDR82Q6UXN9 313 aa16.69■□□□□ 0.26
CACNA1A-257ENST00000638009 LRRC61Q9BV99 259 aa16.69■□□□□ 0.26
CACNA1A-257ENST00000638009 ST20Q9HBF5 79 aa16.69■□□□□ 0.26
CACNA1A-257ENST00000638009 GPR6P46095 362 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-257ENST00000638009 CCL2P13500 99 aa16.69■□□□□ 0.26
CACNA1A-257ENST00000638009 EGR1P18146 543 aa16.69■□□□□ 0.26
CACNA1A-257ENST00000638009 SLC25A53Q5H9E4 307 aa16.69■□□□□ 0.26
CACNA1A-257ENST00000638009 SMIM8Q96KF7 97 aa16.69■□□□□ 0.26
CACNA1A-257ENST00000638009 SRSF1Q07955 248 aaKnown RBP eCLIP16.69■□□□□ 0.26
CACNA1A-257ENST00000638009 KLF12Q9Y4X4 402 aa16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 ST6GALNAC2Q9UJ37 374 aa16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 MRPL52Q86TS9 123 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 IMMP2LQ96T52 175 aa16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 THY1P04216 161 aa16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 UCNP55089 124 aa16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 ARRDC1-AS1Q9H2J1 176 aa16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 APOHP02749 345 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 CBLN1P23435 193 aa16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 TFPI2P48307 235 aa16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 IGLV3-27P01718 113 aa16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 PAQR9Q6ZVX9 377 aa16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 PATE1Q8WXA2 126 aa16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 SMIM14Q96QK8 99 aa16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 DUX3Q96PT4 197 aa16.68■□□□□ 0.26
CACNA1A-257ENST00000638009 LINC00614P0C842 121 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 HYAL3O43820 417 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 SAMD5Q5TGI4 173 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 IL36BQ9NZH7 164 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 ISG15P05161 165 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 MYOD1P15172 320 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 P2RY4P51582 365 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 COQ2Q96H96 371 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 MIXL1Q9H2W2 232 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 SPINT1O43278 529 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 UCP2P55851 309 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 A0A1W2PP11 408 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 DLX4Q92988 240 aaPredicted RBP16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 SMPXQ9UHP9 88 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 KLK2P20151 261 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 LAMTOR2Q9Y2Q5 125 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 TNFRSF6BO95407 300 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 ASCL2Q99929 193 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 ERG28Q9UKR5 140 aa16.67■□□□□ 0.26
CACNA1A-257ENST00000638009 FAM208BQ5VWN6 2430 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 ZNF250P15622 560 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 SPTY2D1-AS1A0A0U1RR47 76 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 UNQ5815/PRO19632Q6UWF5 114 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 TMEM91Q6ZNR0 172 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 SAXO1Q8IYX7 474 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 OR11H4Q8NGC9 324 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 ZNF48Q96MX3 618 aaPredicted RBP16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 WNT10AQ9GZT5 417 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 KIAA1551Q9HCM1 1747 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 ITGB1BP1O14713 200 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 PRR7Q8TB68 274 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 LAMTOR3Q9UHA4 124 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 A0A1W2PR80 420 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 H3BMM0 161 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 M0R381 172 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 LOXL4Q96JB6 756 aa16.66■□□□□ 0.26
CACNA1A-257ENST00000638009 GRIFINA4D1Z8 144 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 HSPE1P61604 102 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 FXYD3Q14802 87 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 EAF1Q96JC9 268 aaPredicted RBP16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 GMLQ99445 158 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 FSTP19883 344 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 SNAI3Q3KNW1 292 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 LINC00305Q7Z4B0 112 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 LURAP1LQ8IV03 231 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 NCOR1P1Q9H4R4 102 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 NYNRINQ9P2P1 1898 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 MPV17P39210 176 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 HSD52Q0P140 79 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 RNASEH2CQ8TDP1 164 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 NMBP08949 121 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 CRYBB3P26998 211 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 INSL4Q14641 139 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 LDLRAD2Q5SZI1 272 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 SUMO4Q6EEV6 95 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 CHCHD1Q96BP2 118 aaKnown RBP16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 CHAC1Q9BUX1 264 aa16.65■□□□□ 0.26
CACNA1A-257ENST00000638009 CEACAM5P06731 702 aa16.64■□□□□ 0.26
CACNA1A-257ENST00000638009 NPIPB11E5RHQ5 1161 aa16.64■□□□□ 0.25
CACNA1A-257ENST00000638009 HOXB1P14653 301 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-257ENST00000638009 HILPDAQ9Y5L2 63 aa16.64■□□□□ 0.25
CACNA1A-257ENST00000638009 FOXI3A8MTJ6 420 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-257ENST00000638009 FXYD1O00168 92 aa16.64■□□□□ 0.25
CACNA1A-257ENST00000638009 INAFM2P0DMQ5 153 aa16.64■□□□□ 0.25
CACNA1A-257ENST00000638009 GGTLC1Q9BX51 225 aa16.64■□□□□ 0.25
CACNA1A-257ENST00000638009 SAA1P0DJI8 122 aaPredicted RBP16.64■□□□□ 0.25
CACNA1A-257ENST00000638009 GPR146Q96CH1 333 aa16.64■□□□□ 0.25
CACNA1A-257ENST00000638009 ABHD17AQ96GS6 310 aa16.64■□□□□ 0.25
CACNA1A-257ENST00000638009 LEPP41159 167 aa16.64■□□□□ 0.25
CACNA1A-257ENST00000638009 TMEM258P61165 79 aa16.64■□□□□ 0.25
CACNA1A-257ENST00000638009 TMEM186Q96B77 213 aa16.64■□□□□ 0.25
CACNA1A-257ENST00000638009 H3BUT2 72 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms